Atomistry » Magnesium » PDB 6zii-6zt3 » 6zpi
Atomistry »
  Magnesium »
    PDB 6zii-6zt3 »
      6zpi »

Magnesium in PDB 6zpi: Microtubule Complexed with KIF15 Motor Domain. Symmetrised Asymmetric Unit

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Microtubule Complexed with KIF15 Motor Domain. Symmetrised Asymmetric Unit (pdb code 6zpi). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Microtubule Complexed with KIF15 Motor Domain. Symmetrised Asymmetric Unit, PDB code: 6zpi:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 6zpi

Go back to Magnesium Binding Sites List in 6zpi
Magnesium binding site 1 out of 2 in the Microtubule Complexed with KIF15 Motor Domain. Symmetrised Asymmetric Unit


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Microtubule Complexed with KIF15 Motor Domain. Symmetrised Asymmetric Unit within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg602

b:628.4
occ:1.00
OG C:SER234 2.1 500.0 1.0
O2B C:ANP601 2.1 599.0 1.0
OG1 C:THR116 2.2 718.5 1.0
O3G C:ANP601 2.2 599.0 1.0
CB C:SER234 2.7 500.0 1.0
PB C:ANP601 3.4 599.0 1.0
CB C:THR116 3.4 718.5 1.0
N C:SER234 3.5 500.0 1.0
PG C:ANP601 3.5 599.0 1.0
CA C:SER234 3.7 500.0 1.0
N3B C:ANP601 3.9 599.0 1.0
OD2 C:ASP265 4.0 566.4 1.0
O1G C:ANP601 4.2 599.0 1.0
N C:THR116 4.2 718.5 1.0
NH1 C:ARG222 4.3 505.3 1.0
NH2 C:ARG222 4.3 505.3 1.0
O1B C:ANP601 4.3 599.0 1.0
O1A C:ANP601 4.4 599.0 1.0
CA C:THR116 4.4 718.5 1.0
CG2 C:THR116 4.4 718.5 1.0
CZ C:ARG222 4.5 505.3 1.0
O3A C:ANP601 4.5 599.0 1.0
C C:SER233 4.6 490.5 1.0
O C:LEU266 4.6 419.3 1.0
OD1 C:ASP265 4.7 566.4 1.0
CG C:ASP265 4.7 566.4 1.0
O2G C:ANP601 4.8 599.0 1.0
C C:SER234 4.8 500.0 1.0
O C:GLU232 4.8 499.0 1.0
O C:SER234 4.9 500.0 1.0
PA C:ANP601 4.9 599.0 1.0

Magnesium binding site 2 out of 2 in 6zpi

Go back to Magnesium Binding Sites List in 6zpi
Magnesium binding site 2 out of 2 in the Microtubule Complexed with KIF15 Motor Domain. Symmetrised Asymmetric Unit


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Microtubule Complexed with KIF15 Motor Domain. Symmetrised Asymmetric Unit within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg502

b:481.0
occ:1.00
O1B A:GTP501 1.8 510.7 1.0
O3G A:GTP501 2.1 510.7 1.0
OE2 A:GLU71 2.6 370.9 1.0
PB A:GTP501 3.0 510.7 1.0
PG A:GTP501 3.2 510.7 1.0
CD A:GLU71 3.3 370.9 1.0
CB A:GLN11 3.4 390.4 1.0
O3B A:GTP501 3.4 510.7 1.0
OE1 A:GLN11 3.5 390.4 1.0
O2G A:GTP501 3.5 510.7 1.0
O3A A:GTP501 3.7 510.7 1.0
OD2 A:ASP69 3.9 350.7 1.0
N A:GLN11 4.0 390.4 1.0
OE1 A:GLU71 4.0 370.9 1.0
CG A:GLU71 4.0 370.9 1.0
CA A:GLN11 4.3 390.4 1.0
O2B A:GTP501 4.3 510.7 1.0
OD1 A:ASP69 4.3 350.7 1.0
CD A:GLN11 4.4 390.4 1.0
O1A A:GTP501 4.4 510.7 1.0
CG A:GLN11 4.5 390.4 1.0
O1G A:GTP501 4.5 510.7 1.0
CG A:ASP69 4.5 350.7 1.0
CB A:GLU71 4.6 370.9 1.0
PA A:GTP501 4.6 510.7 1.0
OG1 A:THR145 4.9 691.7 1.0
CG2 A:VAL74 4.9 261.0 1.0
O2A A:GTP501 4.9 510.7 1.0

Reference:

J.Atherton, J.J.Hummel, N.Olieric, J.Locke, A.Pena, S.S.Rosenfeld, M.O.Steinmetz, C.C.Hoogenraad, C.A.Moores. The Mechanism of Kinesin Inhibition By Kinesin-Binding Protein. Elife V. 9 2020.
ISSN: ESSN 2050-084X
PubMed: 33252036
DOI: 10.7554/ELIFE.61481
Page generated: Wed Oct 2 02:30:34 2024

Last articles

Zn in 1DDK
Zn in 1DCE
Zn in 1DCQ
Zn in 1DCB
Zn in 1DCA
Zn in 1D8W
Zn in 1D9X
Zn in 1D9D
Zn in 1D9Z
Zn in 1D9F
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy