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Magnesium in PDB 6zvc: 14-3-3 Sigma in Complex with Phosphorylated GAB2PT391 Peptide - 48H Incubation

Protein crystallography data

The structure of 14-3-3 Sigma in Complex with Phosphorylated GAB2PT391 Peptide - 48H Incubation, PDB code: 6zvc was solved by A.Ballone, R.A.Lau, F.P.A.Zweipfenning, C.Ottmann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.35 / 2.51
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 82.574, 112.508, 62.665, 90, 90, 90
R / Rfree (%) 17.1 / 22.9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the 14-3-3 Sigma in Complex with Phosphorylated GAB2PT391 Peptide - 48H Incubation (pdb code 6zvc). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the 14-3-3 Sigma in Complex with Phosphorylated GAB2PT391 Peptide - 48H Incubation, PDB code: 6zvc:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 6zvc

Go back to Magnesium Binding Sites List in 6zvc
Magnesium binding site 1 out of 2 in the 14-3-3 Sigma in Complex with Phosphorylated GAB2PT391 Peptide - 48H Incubation


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of 14-3-3 Sigma in Complex with Phosphorylated GAB2PT391 Peptide - 48H Incubation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg301

b:20.2
occ:0.00
OE2 A:GLU188 2.2 8.2 1.0
CD A:GLU188 3.4 7.5 1.0
CG A:GLU188 3.9 6.9 1.0
OE1 A:GLU188 4.4 7.8 1.0

Magnesium binding site 2 out of 2 in 6zvc

Go back to Magnesium Binding Sites List in 6zvc
Magnesium binding site 2 out of 2 in the 14-3-3 Sigma in Complex with Phosphorylated GAB2PT391 Peptide - 48H Incubation


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of 14-3-3 Sigma in Complex with Phosphorylated GAB2PT391 Peptide - 48H Incubation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg302

b:17.1
occ:0.00
O A:ALA-3 2.2 29.9 1.0
CB A:SER0 3.0 10.7 1.0
C A:ALA-3 3.1 28.1 1.0
N A:SER0 3.2 10.9 1.0
CA A:MET-2 3.4 17.8 1.0
C A:MET-2 3.5 14.1 1.0
CA A:SER0 3.5 10.5 1.0
N A:MET-2 3.7 22.1 1.0
OG A:SER0 3.7 11.3 1.0
N A:GLY-1 3.8 12.8 1.0
N A:MET1 3.8 9.4 1.0
O A:MET-2 3.9 12.8 1.0
C A:SER0 3.9 10.2 1.0
CA A:ALA-3 4.3 32.3 1.0
C A:GLY-1 4.3 11.8 1.0
O A:HOH453 4.5 17.5 1.0
CA A:GLY-1 4.6 12.2 1.0
CB A:MET1 4.7 10.2 1.0
CA A:MET1 4.8 9.2 1.0
CB A:MET-2 4.9 17.8 1.0
O A:SER0 4.9 10.0 1.0
O A:GLY-4 5.0 29.9 1.0

Reference:

A.Ballone, R.A.Lau, F.P.A.Zweipfenning, C.Ottmann. A New Soaking Procedure For X-Ray Crystallography Structural Determination of Protein-Peptide Complexes To Be Published.
Page generated: Wed Oct 2 03:12:32 2024

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