Magnesium in PDB 6zxa: LH2 Complex From Marichromatium Purpuratum
Magnesium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
21;
Binding sites:
The binding sites of Magnesium atom in the LH2 Complex From Marichromatium Purpuratum
(pdb code 6zxa). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 21 binding sites of Magnesium where determined in the
LH2 Complex From Marichromatium Purpuratum, PDB code: 6zxa:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 21 in 6zxa
Go back to
Magnesium Binding Sites List in 6zxa
Magnesium binding site 1 out
of 21 in the LH2 Complex From Marichromatium Purpuratum
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of LH2 Complex From Marichromatium Purpuratum within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg101
b:20.6
occ:1.00
|
MG
|
A:BCL101
|
0.0
|
20.6
|
1.0
|
|
ND
|
A:BCL101
|
2.0
|
16.4
|
1.0
|
|
NB
|
A:BCL101
|
2.1
|
22.1
|
1.0
|
|
NC
|
A:BCL101
|
2.1
|
19.7
|
1.0
|
|
NA
|
A:BCL101
|
2.2
|
24.9
|
1.0
|
|
OD2
|
A:ASP21
|
2.9
|
22.8
|
1.0
|
|
C4D
|
A:BCL101
|
3.0
|
16.3
|
1.0
|
|
C1B
|
A:BCL101
|
3.1
|
24.1
|
1.0
|
|
C4B
|
A:BCL101
|
3.1
|
24.3
|
1.0
|
|
C1C
|
A:BCL101
|
3.1
|
21.6
|
1.0
|
|
C1D
|
A:BCL101
|
3.1
|
16.2
|
1.0
|
|
C4A
|
A:BCL101
|
3.1
|
27.2
|
1.0
|
|
C4C
|
A:BCL101
|
3.2
|
18.2
|
1.0
|
|
C1A
|
A:BCL101
|
3.2
|
25.6
|
1.0
|
|
OD1
|
A:ASP21
|
3.3
|
30.6
|
1.0
|
|
CHC
|
A:BCL101
|
3.4
|
22.1
|
1.0
|
|
CG
|
A:ASP21
|
3.4
|
26.8
|
1.0
|
|
CHB
|
A:BCL101
|
3.4
|
24.8
|
1.0
|
|
CHA
|
A:BCL101
|
3.4
|
21.1
|
1.0
|
|
CHD
|
A:BCL101
|
3.5
|
17.1
|
1.0
|
|
C8
|
A:QS2102
|
3.7
|
30.3
|
1.0
|
|
C9
|
A:QS2102
|
3.9
|
27.7
|
1.0
|
|
C7
|
A:QS2102
|
4.0
|
26.9
|
1.0
|
|
C3D
|
A:BCL101
|
4.2
|
16.4
|
1.0
|
|
C10
|
A:QS2102
|
4.2
|
32.0
|
1.0
|
|
C2B
|
A:BCL101
|
4.3
|
24.9
|
1.0
|
|
C2D
|
A:BCL101
|
4.3
|
16.0
|
1.0
|
|
C3B
|
A:BCL101
|
4.3
|
24.1
|
1.0
|
|
C2C
|
A:BCL101
|
4.4
|
22.5
|
1.0
|
|
C3C
|
A:BCL101
|
4.4
|
22.7
|
1.0
|
|
C3A
|
A:BCL101
|
4.5
|
29.9
|
1.0
|
|
C2A
|
A:BCL101
|
4.5
|
30.0
|
1.0
|
|
C6
|
A:QS2102
|
4.5
|
28.8
|
1.0
|
|
C27
|
A:QS2102
|
4.6
|
28.4
|
1.0
|
|
CB
|
A:ASP21
|
4.7
|
25.8
|
1.0
|
|
CBD
|
A:BCL101
|
4.9
|
23.3
|
1.0
|
|
Magnesium binding site 2 out
of 21 in 6zxa
Go back to
Magnesium Binding Sites List in 6zxa
Magnesium binding site 2 out
of 21 in the LH2 Complex From Marichromatium Purpuratum
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of LH2 Complex From Marichromatium Purpuratum within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg101
b:13.1
occ:1.00
|
MG
|
B:BCL101
|
0.0
|
13.1
|
1.0
|
|
ND
|
B:BCL101
|
2.0
|
13.1
|
1.0
|
|
NB
|
B:BCL101
|
2.1
|
13.4
|
1.0
|
|
NC
|
B:BCL101
|
2.1
|
15.3
|
1.0
|
|
NA
|
B:BCL101
|
2.2
|
13.6
|
1.0
|
|
NE2
|
A:HIS49
|
2.6
|
10.5
|
1.0
|
|
C4D
|
B:BCL101
|
3.0
|
13.1
|
1.0
|
|
C4B
|
B:BCL101
|
3.1
|
14.7
|
1.0
|
|
C1B
|
B:BCL101
|
3.1
|
13.6
|
1.0
|
|
C1C
|
B:BCL101
|
3.1
|
16.0
|
1.0
|
|
C1D
|
B:BCL101
|
3.1
|
14.3
|
1.0
|
|
C4A
|
B:BCL101
|
3.1
|
13.3
|
1.0
|
|
C4C
|
B:BCL101
|
3.1
|
15.4
|
1.0
|
|
C1A
|
B:BCL101
|
3.2
|
14.3
|
1.0
|
|
CHC
|
B:BCL101
|
3.4
|
13.7
|
1.0
|
|
CHB
|
B:BCL101
|
3.4
|
13.3
|
1.0
|
|
CHA
|
B:BCL101
|
3.4
|
13.6
|
1.0
|
|
CD2
|
A:HIS49
|
3.4
|
11.8
|
1.0
|
|
CHD
|
B:BCL101
|
3.5
|
13.8
|
1.0
|
|
CE1
|
A:HIS49
|
3.7
|
11.6
|
1.0
|
|
C3D
|
B:BCL101
|
4.2
|
14.2
|
1.0
|
|
C2B
|
B:BCL101
|
4.3
|
15.5
|
1.0
|
|
C2D
|
B:BCL101
|
4.3
|
14.5
|
1.0
|
|
C3B
|
B:BCL101
|
4.3
|
16.0
|
1.0
|
|
CMD
|
B:BCL102
|
4.4
|
12.1
|
1.0
|
|
C2C
|
B:BCL101
|
4.4
|
18.4
|
1.0
|
|
C3C
|
B:BCL101
|
4.4
|
19.0
|
1.0
|
|
C3A
|
B:BCL101
|
4.4
|
15.1
|
1.0
|
|
C2A
|
B:BCL101
|
4.5
|
16.5
|
1.0
|
|
CG
|
A:HIS49
|
4.7
|
12.3
|
1.0
|
|
ND1
|
A:HIS49
|
4.8
|
10.7
|
1.0
|
|
C29
|
E:QSE101
|
4.8
|
15.8
|
1.0
|
|
CBD
|
B:BCL101
|
4.8
|
15.4
|
1.0
|
|
Magnesium binding site 3 out
of 21 in 6zxa
Go back to
Magnesium Binding Sites List in 6zxa
Magnesium binding site 3 out
of 21 in the LH2 Complex From Marichromatium Purpuratum
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of LH2 Complex From Marichromatium Purpuratum within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg102
b:14.2
occ:1.00
|
MG
|
B:BCL102
|
0.0
|
14.2
|
1.0
|
|
ND
|
B:BCL102
|
2.0
|
12.8
|
1.0
|
|
NB
|
B:BCL102
|
2.1
|
16.5
|
1.0
|
|
NC
|
B:BCL102
|
2.1
|
15.0
|
1.0
|
|
NA
|
B:BCL102
|
2.2
|
16.8
|
1.0
|
|
NE2
|
B:HIS38
|
2.6
|
21.1
|
1.0
|
|
C4D
|
B:BCL102
|
3.0
|
12.0
|
1.0
|
|
C4B
|
B:BCL102
|
3.1
|
18.3
|
1.0
|
|
C1B
|
B:BCL102
|
3.1
|
18.3
|
1.0
|
|
C1C
|
B:BCL102
|
3.1
|
16.6
|
1.0
|
|
C1D
|
B:BCL102
|
3.1
|
12.1
|
1.0
|
|
C4A
|
B:BCL102
|
3.1
|
19.5
|
1.0
|
|
C4C
|
B:BCL102
|
3.1
|
14.4
|
1.0
|
|
C1A
|
B:BCL102
|
3.2
|
15.9
|
1.0
|
|
CHC
|
B:BCL102
|
3.4
|
16.1
|
1.0
|
|
CHB
|
B:BCL102
|
3.4
|
19.2
|
1.0
|
|
CHA
|
B:BCL102
|
3.4
|
13.0
|
1.0
|
|
CHD
|
B:BCL102
|
3.5
|
12.5
|
1.0
|
|
CD2
|
B:HIS38
|
3.5
|
22.2
|
1.0
|
|
CE1
|
B:HIS38
|
3.5
|
22.8
|
1.0
|
|
C3D
|
B:BCL102
|
4.2
|
12.4
|
1.0
|
|
C2B
|
B:BCL102
|
4.3
|
22.5
|
1.0
|
|
C2D
|
B:BCL102
|
4.3
|
11.6
|
1.0
|
|
C3B
|
B:BCL102
|
4.3
|
21.9
|
1.0
|
|
CBB
|
N:BCL102
|
4.3
|
19.7
|
1.0
|
|
C2C
|
B:BCL102
|
4.4
|
17.7
|
1.0
|
|
C3C
|
B:BCL102
|
4.4
|
17.6
|
1.0
|
|
C3A
|
B:BCL102
|
4.4
|
21.8
|
1.0
|
|
CG1
|
A:ILE48
|
4.5
|
22.5
|
1.0
|
|
C2A
|
B:BCL102
|
4.5
|
20.7
|
1.0
|
|
ND1
|
B:HIS38
|
4.7
|
26.2
|
1.0
|
|
CD1
|
A:ILE48
|
4.7
|
26.4
|
1.0
|
|
CG
|
B:HIS38
|
4.7
|
25.1
|
1.0
|
|
C5
|
B:BCL102
|
4.9
|
102.0
|
1.0
|
|
CBD
|
B:BCL102
|
4.9
|
13.6
|
1.0
|
|
Magnesium binding site 4 out
of 21 in 6zxa
Go back to
Magnesium Binding Sites List in 6zxa
Magnesium binding site 4 out
of 21 in the LH2 Complex From Marichromatium Purpuratum
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of LH2 Complex From Marichromatium Purpuratum within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg102
b:20.7
occ:1.00
|
MG
|
C:BCL102
|
0.0
|
20.7
|
1.0
|
|
ND
|
C:BCL102
|
2.0
|
16.9
|
1.0
|
|
NB
|
C:BCL102
|
2.1
|
22.5
|
1.0
|
|
NC
|
C:BCL102
|
2.1
|
20.1
|
1.0
|
|
NA
|
C:BCL102
|
2.2
|
24.3
|
1.0
|
|
OD2
|
C:ASP21
|
2.8
|
22.2
|
1.0
|
|
C4D
|
C:BCL102
|
3.0
|
17.2
|
1.0
|
|
C4B
|
C:BCL102
|
3.1
|
24.3
|
1.0
|
|
C1B
|
C:BCL102
|
3.1
|
24.1
|
1.0
|
|
C1C
|
C:BCL102
|
3.1
|
21.8
|
1.0
|
|
C1D
|
C:BCL102
|
3.1
|
16.1
|
1.0
|
|
C4A
|
C:BCL102
|
3.1
|
26.1
|
1.0
|
|
C4C
|
C:BCL102
|
3.2
|
18.5
|
1.0
|
|
C1A
|
C:BCL102
|
3.2
|
25.7
|
1.0
|
|
OD1
|
C:ASP21
|
3.2
|
29.1
|
1.0
|
|
CG
|
C:ASP21
|
3.3
|
25.6
|
1.0
|
|
CHC
|
C:BCL102
|
3.4
|
22.1
|
1.0
|
|
CHB
|
C:BCL102
|
3.4
|
24.2
|
1.0
|
|
CHA
|
C:BCL102
|
3.4
|
21.7
|
1.0
|
|
CHD
|
C:BCL102
|
3.5
|
17.1
|
1.0
|
|
C8
|
B:QS2103
|
3.7
|
27.5
|
1.0
|
|
C9
|
B:QS2103
|
3.9
|
25.9
|
1.0
|
|
C7
|
B:QS2103
|
4.0
|
24.9
|
1.0
|
|
C3D
|
C:BCL102
|
4.2
|
16.8
|
1.0
|
|
C10
|
B:QS2103
|
4.2
|
30.6
|
1.0
|
|
C2B
|
C:BCL102
|
4.3
|
25.4
|
1.0
|
|
C2D
|
C:BCL102
|
4.3
|
16.1
|
1.0
|
|
C3B
|
C:BCL102
|
4.3
|
24.4
|
1.0
|
|
C2C
|
C:BCL102
|
4.4
|
22.5
|
1.0
|
|
C3C
|
C:BCL102
|
4.4
|
22.5
|
1.0
|
|
C3A
|
C:BCL102
|
4.5
|
29.9
|
1.0
|
|
C2A
|
C:BCL102
|
4.5
|
29.8
|
1.0
|
|
C6
|
B:QS2103
|
4.5
|
27.9
|
1.0
|
|
C27
|
B:QS2103
|
4.6
|
26.8
|
1.0
|
|
CB
|
C:ASP21
|
4.7
|
25.3
|
1.0
|
|
CBD
|
C:BCL102
|
4.9
|
23.3
|
1.0
|
|
CA
|
C:PRO18
|
5.0
|
45.4
|
1.0
|
|
Magnesium binding site 5 out
of 21 in 6zxa
Go back to
Magnesium Binding Sites List in 6zxa
Magnesium binding site 5 out
of 21 in the LH2 Complex From Marichromatium Purpuratum
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of LH2 Complex From Marichromatium Purpuratum within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg101
b:13.1
occ:1.00
|
MG
|
D:BCL101
|
0.0
|
13.1
|
1.0
|
|
ND
|
D:BCL101
|
2.0
|
13.0
|
1.0
|
|
NB
|
D:BCL101
|
2.1
|
13.3
|
1.0
|
|
NC
|
D:BCL101
|
2.1
|
15.2
|
1.0
|
|
NA
|
D:BCL101
|
2.2
|
13.4
|
1.0
|
|
NE2
|
C:HIS49
|
2.6
|
10.8
|
1.0
|
|
C4D
|
D:BCL101
|
3.0
|
13.1
|
1.0
|
|
C4B
|
D:BCL101
|
3.1
|
14.7
|
1.0
|
|
C1B
|
D:BCL101
|
3.1
|
13.6
|
1.0
|
|
C1C
|
D:BCL101
|
3.1
|
15.8
|
1.0
|
|
C1D
|
D:BCL101
|
3.1
|
14.2
|
1.0
|
|
C4A
|
D:BCL101
|
3.1
|
13.4
|
1.0
|
|
C4C
|
D:BCL101
|
3.1
|
15.3
|
1.0
|
|
C1A
|
D:BCL101
|
3.2
|
14.2
|
1.0
|
|
CHC
|
D:BCL101
|
3.4
|
13.6
|
1.0
|
|
CHB
|
D:BCL101
|
3.4
|
13.4
|
1.0
|
|
CHA
|
D:BCL101
|
3.4
|
13.6
|
1.0
|
|
CD2
|
C:HIS49
|
3.4
|
11.9
|
1.0
|
|
CHD
|
D:BCL101
|
3.5
|
13.7
|
1.0
|
|
CE1
|
C:HIS49
|
3.7
|
11.9
|
1.0
|
|
C3D
|
D:BCL101
|
4.2
|
14.2
|
1.0
|
|
C2B
|
D:BCL101
|
4.3
|
15.5
|
1.0
|
|
C2D
|
D:BCL101
|
4.3
|
14.5
|
1.0
|
|
C3B
|
D:BCL101
|
4.3
|
16.0
|
1.0
|
|
CMD
|
D:BCL102
|
4.4
|
11.9
|
1.0
|
|
C2C
|
D:BCL101
|
4.4
|
18.0
|
1.0
|
|
C3C
|
D:BCL101
|
4.4
|
18.7
|
1.0
|
|
C3A
|
D:BCL101
|
4.4
|
15.3
|
1.0
|
|
C2A
|
D:BCL101
|
4.5
|
16.5
|
1.0
|
|
CG
|
C:HIS49
|
4.7
|
12.5
|
1.0
|
|
ND1
|
C:HIS49
|
4.8
|
11.0
|
1.0
|
|
C29
|
F:QSE101
|
4.8
|
15.9
|
1.0
|
|
CBD
|
D:BCL101
|
4.8
|
15.3
|
1.0
|
|
Magnesium binding site 6 out
of 21 in 6zxa
Go back to
Magnesium Binding Sites List in 6zxa
Magnesium binding site 6 out
of 21 in the LH2 Complex From Marichromatium Purpuratum
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of LH2 Complex From Marichromatium Purpuratum within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg102
b:14.0
occ:1.00
|
MG
|
D:BCL102
|
0.0
|
14.0
|
1.0
|
|
ND
|
D:BCL102
|
2.0
|
12.7
|
1.0
|
|
NB
|
D:BCL102
|
2.1
|
16.4
|
1.0
|
|
NC
|
D:BCL102
|
2.1
|
14.6
|
1.0
|
|
NA
|
D:BCL102
|
2.2
|
15.9
|
1.0
|
|
NE2
|
D:HIS38
|
2.6
|
20.5
|
1.0
|
|
C4D
|
D:BCL102
|
3.0
|
12.1
|
1.0
|
|
C4B
|
D:BCL102
|
3.1
|
18.1
|
1.0
|
|
C1B
|
D:BCL102
|
3.1
|
18.1
|
1.0
|
|
C1C
|
D:BCL102
|
3.1
|
16.3
|
1.0
|
|
C1D
|
D:BCL102
|
3.1
|
12.0
|
1.0
|
|
C4A
|
D:BCL102
|
3.1
|
18.6
|
1.0
|
|
C4C
|
D:BCL102
|
3.1
|
14.2
|
1.0
|
|
C1A
|
D:BCL102
|
3.2
|
15.2
|
1.0
|
|
CHC
|
D:BCL102
|
3.4
|
15.8
|
1.0
|
|
CHB
|
D:BCL102
|
3.4
|
18.6
|
1.0
|
|
CHA
|
D:BCL102
|
3.4
|
12.9
|
1.0
|
|
CHD
|
D:BCL102
|
3.5
|
12.5
|
1.0
|
|
CD2
|
D:HIS38
|
3.5
|
22.2
|
1.0
|
|
CE1
|
D:HIS38
|
3.5
|
22.4
|
1.0
|
|
C3D
|
D:BCL102
|
4.2
|
12.6
|
1.0
|
|
C2B
|
D:BCL102
|
4.3
|
22.7
|
1.0
|
|
C2D
|
D:BCL102
|
4.3
|
11.7
|
1.0
|
|
C3B
|
D:BCL102
|
4.3
|
22.1
|
1.0
|
|
CBB
|
B:BCL101
|
4.4
|
19.9
|
1.0
|
|
C2C
|
D:BCL102
|
4.4
|
16.9
|
1.0
|
|
C3C
|
D:BCL102
|
4.4
|
17.3
|
1.0
|
|
C3A
|
D:BCL102
|
4.4
|
20.9
|
1.0
|
|
C2A
|
D:BCL102
|
4.5
|
20.1
|
1.0
|
|
CG1
|
C:ILE48
|
4.6
|
22.6
|
1.0
|
|
ND1
|
D:HIS38
|
4.7
|
26.1
|
1.0
|
|
CG
|
D:HIS38
|
4.7
|
25.1
|
1.0
|
|
CD1
|
C:ILE48
|
4.8
|
27.1
|
1.0
|
|
C5
|
D:BCL102
|
4.9
|
80.5
|
1.0
|
|
CBD
|
D:BCL102
|
4.9
|
13.7
|
1.0
|
|
Magnesium binding site 7 out
of 21 in 6zxa
Go back to
Magnesium Binding Sites List in 6zxa
Magnesium binding site 7 out
of 21 in the LH2 Complex From Marichromatium Purpuratum
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of LH2 Complex From Marichromatium Purpuratum within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg102
b:20.5
occ:1.00
|
MG
|
E:BCL102
|
0.0
|
20.5
|
1.0
|
|
ND
|
E:BCL102
|
2.0
|
17.1
|
1.0
|
|
NB
|
E:BCL102
|
2.1
|
22.0
|
1.0
|
|
NC
|
E:BCL102
|
2.1
|
20.2
|
1.0
|
|
NA
|
E:BCL102
|
2.2
|
24.0
|
1.0
|
|
OD2
|
E:ASP21
|
2.7
|
22.2
|
1.0
|
|
C4D
|
E:BCL102
|
3.0
|
17.3
|
1.0
|
|
C1B
|
E:BCL102
|
3.1
|
23.9
|
1.0
|
|
C4B
|
E:BCL102
|
3.1
|
24.0
|
1.0
|
|
C1C
|
E:BCL102
|
3.1
|
21.7
|
1.0
|
|
C1D
|
E:BCL102
|
3.1
|
16.3
|
1.0
|
|
C4A
|
E:BCL102
|
3.1
|
26.1
|
1.0
|
|
C4C
|
E:BCL102
|
3.2
|
18.7
|
1.0
|
|
OD1
|
E:ASP21
|
3.2
|
29.1
|
1.0
|
|
C1A
|
E:BCL102
|
3.2
|
25.4
|
1.0
|
|
CG
|
E:ASP21
|
3.3
|
25.8
|
1.0
|
|
CHC
|
E:BCL102
|
3.4
|
22.1
|
1.0
|
|
CHB
|
E:BCL102
|
3.4
|
24.2
|
1.0
|
|
CHA
|
E:BCL102
|
3.4
|
21.7
|
1.0
|
|
CHD
|
E:BCL102
|
3.5
|
17.4
|
1.0
|
|
C8
|
E:QS2103
|
3.7
|
26.4
|
1.0
|
|
C9
|
E:QS2103
|
3.9
|
25.7
|
1.0
|
|
C7
|
E:QS2103
|
4.0
|
24.5
|
1.0
|
|
C3D
|
E:BCL102
|
4.2
|
16.9
|
1.0
|
|
C10
|
E:QS2103
|
4.2
|
30.1
|
1.0
|
|
C2B
|
E:BCL102
|
4.3
|
25.0
|
1.0
|
|
C2D
|
E:BCL102
|
4.3
|
16.2
|
1.0
|
|
C3B
|
E:BCL102
|
4.3
|
24.3
|
1.0
|
|
C2C
|
E:BCL102
|
4.4
|
22.4
|
1.0
|
|
C3C
|
E:BCL102
|
4.4
|
22.9
|
1.0
|
|
C3A
|
E:BCL102
|
4.5
|
29.6
|
1.0
|
|
C2A
|
E:BCL102
|
4.5
|
29.5
|
1.0
|
|
C6
|
E:QS2103
|
4.5
|
25.7
|
1.0
|
|
C27
|
E:QS2103
|
4.6
|
26.8
|
1.0
|
|
CB
|
E:ASP21
|
4.6
|
25.6
|
1.0
|
|
CBD
|
E:BCL102
|
4.9
|
23.6
|
1.0
|
|
CA
|
E:PRO18
|
5.0
|
45.4
|
1.0
|
|
Magnesium binding site 8 out
of 21 in 6zxa
Go back to
Magnesium Binding Sites List in 6zxa
Magnesium binding site 8 out
of 21 in the LH2 Complex From Marichromatium Purpuratum
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of LH2 Complex From Marichromatium Purpuratum within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Mg102
b:13.2
occ:1.00
|
MG
|
F:BCL102
|
0.0
|
13.2
|
1.0
|
|
ND
|
F:BCL102
|
2.0
|
13.1
|
1.0
|
|
NB
|
F:BCL102
|
2.1
|
13.6
|
1.0
|
|
NC
|
F:BCL102
|
2.1
|
15.3
|
1.0
|
|
NA
|
F:BCL102
|
2.2
|
13.6
|
1.0
|
|
NE2
|
E:HIS49
|
2.6
|
10.5
|
1.0
|
|
C4D
|
F:BCL102
|
3.0
|
13.2
|
1.0
|
|
C4B
|
F:BCL102
|
3.1
|
14.8
|
1.0
|
|
C1B
|
F:BCL102
|
3.1
|
13.8
|
1.0
|
|
C1C
|
F:BCL102
|
3.1
|
15.9
|
1.0
|
|
C1D
|
F:BCL102
|
3.1
|
14.4
|
1.0
|
|
C4A
|
F:BCL102
|
3.1
|
13.6
|
1.0
|
|
C4C
|
F:BCL102
|
3.1
|
15.4
|
1.0
|
|
C1A
|
F:BCL102
|
3.2
|
14.4
|
1.0
|
|
CHC
|
F:BCL102
|
3.4
|
13.7
|
1.0
|
|
CHB
|
F:BCL102
|
3.4
|
13.6
|
1.0
|
|
CHA
|
F:BCL102
|
3.4
|
13.7
|
1.0
|
|
CD2
|
E:HIS49
|
3.4
|
11.7
|
1.0
|
|
CHD
|
F:BCL102
|
3.5
|
13.9
|
1.0
|
|
CE1
|
E:HIS49
|
3.7
|
11.6
|
1.0
|
|
C3D
|
F:BCL102
|
4.2
|
14.3
|
1.0
|
|
C2B
|
F:BCL102
|
4.3
|
15.7
|
1.0
|
|
C2D
|
F:BCL102
|
4.3
|
14.7
|
1.0
|
|
C3B
|
F:BCL102
|
4.3
|
16.1
|
1.0
|
|
C2C
|
F:BCL102
|
4.4
|
18.3
|
1.0
|
|
CMD
|
F:BCL103
|
4.4
|
12.1
|
1.0
|
|
C3C
|
F:BCL102
|
4.4
|
18.8
|
1.0
|
|
C3A
|
F:BCL102
|
4.4
|
15.4
|
1.0
|
|
C2A
|
F:BCL102
|
4.5
|
16.7
|
1.0
|
|
CG
|
E:HIS49
|
4.7
|
12.2
|
1.0
|
|
ND1
|
E:HIS49
|
4.8
|
10.7
|
1.0
|
|
C29
|
H:QSE101
|
4.8
|
15.9
|
1.0
|
|
CBD
|
F:BCL102
|
4.8
|
15.4
|
1.0
|
|
Magnesium binding site 9 out
of 21 in 6zxa
Go back to
Magnesium Binding Sites List in 6zxa
Magnesium binding site 9 out
of 21 in the LH2 Complex From Marichromatium Purpuratum
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of LH2 Complex From Marichromatium Purpuratum within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Mg103
b:14.0
occ:1.00
|
MG
|
F:BCL103
|
0.0
|
14.0
|
1.0
|
|
ND
|
F:BCL103
|
2.0
|
12.7
|
1.0
|
|
NB
|
F:BCL103
|
2.1
|
16.4
|
1.0
|
|
NC
|
F:BCL103
|
2.1
|
14.6
|
1.0
|
|
NA
|
F:BCL103
|
2.2
|
16.0
|
1.0
|
|
NE2
|
F:HIS38
|
2.6
|
20.6
|
1.0
|
|
C4D
|
F:BCL103
|
3.0
|
12.1
|
1.0
|
|
C4B
|
F:BCL103
|
3.1
|
17.9
|
1.0
|
|
C1B
|
F:BCL103
|
3.1
|
18.0
|
1.0
|
|
C1C
|
F:BCL103
|
3.1
|
16.4
|
1.0
|
|
C1D
|
F:BCL103
|
3.1
|
12.0
|
1.0
|
|
C4A
|
F:BCL103
|
3.1
|
18.6
|
1.0
|
|
C4C
|
F:BCL103
|
3.1
|
14.3
|
1.0
|
|
C1A
|
F:BCL103
|
3.2
|
15.3
|
1.0
|
|
CHC
|
F:BCL103
|
3.4
|
15.8
|
1.0
|
|
CHB
|
F:BCL103
|
3.4
|
18.5
|
1.0
|
|
CHA
|
F:BCL103
|
3.4
|
13.1
|
1.0
|
|
CHD
|
F:BCL103
|
3.5
|
12.5
|
1.0
|
|
CD2
|
F:HIS38
|
3.5
|
22.2
|
1.0
|
|
CE1
|
F:HIS38
|
3.5
|
22.4
|
1.0
|
|
C3D
|
F:BCL103
|
4.2
|
12.6
|
1.0
|
|
C2B
|
F:BCL103
|
4.3
|
22.6
|
1.0
|
|
C2D
|
F:BCL103
|
4.3
|
11.7
|
1.0
|
|
C3B
|
F:BCL103
|
4.3
|
21.7
|
1.0
|
|
CBB
|
D:BCL101
|
4.4
|
20.0
|
1.0
|
|
C2C
|
F:BCL103
|
4.4
|
17.1
|
1.0
|
|
C3C
|
F:BCL103
|
4.4
|
17.4
|
1.0
|
|
C3A
|
F:BCL103
|
4.4
|
21.1
|
1.0
|
|
C2A
|
F:BCL103
|
4.5
|
20.3
|
1.0
|
|
CG1
|
E:ILE48
|
4.6
|
22.4
|
1.0
|
|
ND1
|
F:HIS38
|
4.7
|
25.9
|
1.0
|
|
CG
|
F:HIS38
|
4.7
|
24.9
|
1.0
|
|
CD1
|
E:ILE48
|
4.8
|
26.7
|
1.0
|
|
C5
|
F:BCL103
|
4.9
|
80.2
|
1.0
|
|
CBD
|
F:BCL103
|
4.9
|
13.8
|
1.0
|
|
Magnesium binding site 10 out
of 21 in 6zxa
Go back to
Magnesium Binding Sites List in 6zxa
Magnesium binding site 10 out
of 21 in the LH2 Complex From Marichromatium Purpuratum
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of LH2 Complex From Marichromatium Purpuratum within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Mg101
b:20.9
occ:1.00
|
MG
|
G:BCL101
|
0.0
|
20.9
|
1.0
|
|
ND
|
G:BCL101
|
2.0
|
17.2
|
1.0
|
|
NB
|
G:BCL101
|
2.1
|
22.4
|
1.0
|
|
NC
|
G:BCL101
|
2.1
|
20.1
|
1.0
|
|
NA
|
G:BCL101
|
2.2
|
24.3
|
1.0
|
|
OD2
|
G:ASP21
|
2.7
|
22.0
|
1.0
|
|
C4D
|
G:BCL101
|
3.0
|
17.3
|
1.0
|
|
C1B
|
G:BCL101
|
3.1
|
24.4
|
1.0
|
|
C4B
|
G:BCL101
|
3.1
|
24.6
|
1.0
|
|
C1C
|
G:BCL101
|
3.1
|
21.8
|
1.0
|
|
C1D
|
G:BCL101
|
3.1
|
16.4
|
1.0
|
|
C4A
|
G:BCL101
|
3.1
|
26.5
|
1.0
|
|
C4C
|
G:BCL101
|
3.2
|
18.5
|
1.0
|
|
OD1
|
G:ASP21
|
3.2
|
29.9
|
1.0
|
|
C1A
|
G:BCL101
|
3.2
|
25.6
|
1.0
|
|
CG
|
G:ASP21
|
3.3
|
26.4
|
1.0
|
|
CHC
|
G:BCL101
|
3.4
|
22.4
|
1.0
|
|
CHB
|
G:BCL101
|
3.4
|
24.5
|
1.0
|
|
CHA
|
G:BCL101
|
3.4
|
21.8
|
1.0
|
|
CHD
|
G:BCL101
|
3.5
|
17.3
|
1.0
|
|
C8
|
G:QS2102
|
3.7
|
26.1
|
1.0
|
|
C9
|
G:QS2102
|
3.9
|
26.0
|
1.0
|
|
C7
|
G:QS2102
|
4.0
|
24.7
|
1.0
|
|
C3D
|
G:BCL101
|
4.2
|
16.9
|
1.0
|
|
C10
|
G:QS2102
|
4.2
|
30.3
|
1.0
|
|
C2B
|
G:BCL101
|
4.3
|
25.3
|
1.0
|
|
C2D
|
G:BCL101
|
4.3
|
16.3
|
1.0
|
|
C3B
|
G:BCL101
|
4.3
|
24.4
|
1.0
|
|
C2C
|
G:BCL101
|
4.4
|
22.7
|
1.0
|
|
C3C
|
G:BCL101
|
4.4
|
22.9
|
1.0
|
|
C3A
|
G:BCL101
|
4.5
|
29.9
|
1.0
|
|
C2A
|
G:BCL101
|
4.5
|
29.8
|
1.0
|
|
C6
|
G:QS2102
|
4.5
|
24.7
|
1.0
|
|
C27
|
G:QS2102
|
4.6
|
27.4
|
1.0
|
|
CB
|
G:ASP21
|
4.6
|
25.5
|
1.0
|
|
CBD
|
G:BCL101
|
4.9
|
23.6
|
1.0
|
|
CA
|
G:PRO18
|
5.0
|
45.0
|
1.0
|
|
Reference:
A.T.Gardiner,
K.Naydenova,
P.Castro-Hartmann,
T.C.Nguyen-Phan,
C.J.Russo,
K.Sader,
C.N.Hunter,
R.J.Cogdell,
P.Qian.
The 2.4 Angstrom Cryo-Em Structure of A Heptameric Light-Harvesting 2 Complex Reveals Two Carotenoid Energy Transfer Pathways. Sci Adv V. 7 2021.
ISSN: ESSN 2375-2548
PubMed: 33579696
DOI: 10.1126/SCIADV.ABE4650
Page generated: Wed Mar 3 14:59:53 2021
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