Magnesium in PDB 6zxq: Adenylosuccinate Synthetase From H. Pylori in Complex with Hda, Gdp, Imo, Mg

All present enzymatic activity of Adenylosuccinate Synthetase From H. Pylori in Complex with Hda, Gdp, Imo, Mg:
6.3.4.4;

The structure of Adenylosuccinate Synthetase From H. Pylori in Complex with Hda, Gdp, Imo, Mg, PDB code: 6zxq was solved by A.Bubic, Z.Stefanic, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.46 / 1.40
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	120.706, 68.362, 68.828, 90, 121.11, 90
R / Rfree (%)	15.1 / 19.3

The binding sites of Magnesium atom in the Adenylosuccinate Synthetase From H. Pylori in Complex with Hda, Gdp, Imo, Mg (pdb code 6zxq). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Adenylosuccinate Synthetase From H. Pylori in Complex with Hda, Gdp, Imo, Mg, PDB code: 6zxq:

Magnesium binding site 1 out of 1 in the Adenylosuccinate Synthetase From H. Pylori in Complex with Hda, Gdp, Imo, Mg


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Adenylosuccinate Synthetase From H. Pylori in Complex with Hda, Gdp, Imo, Mg within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg504 b:14.2 occ:1.00 O3B A:GDP502 2.0 13.9 1.0 O3 A:IMO503 2.0 16.3 1.0 O2A A:GDP502 2.1 14.3 1.0 O A:GLY39 2.1 13.4 1.0 O A:HDA501 2.1 18.6 1.0 OD1 A:ASP12 2.1 15.7 1.0 C A:HDA501 3.0 18.5 1.0 C A:GLY39 3.2 12.7 1.0 PA A:GDP502 3.2 14.5 1.0 P A:IMO503 3.3 14.4 1.0 PB A:GDP502 3.3 14.0 1.0 CG A:ASP12 3.3 14.9 1.0 O3A A:GDP502 3.5 13.1 1.0 O1 A:IMO503 3.6 15.3 1.0 N A:GLY39 3.7 14.5 1.0 CA A:GLY39 3.9 14.6 1.0 CA A:ASP12 3.9 13.8 1.0 OG1 A:THR290 3.9 17.9 1.0 NA A:HDA501 4.0 19.9 1.0 CB A:ASP12 4.0 14.8 1.0 O1A A:GDP502 4.0 14.3 1.0 CD2 A:HIS40 4.1 16.3 1.0 OB A:HDA501 4.2 26.0 1.0 N A:ASP12 4.2 13.1 1.0 O1B A:GDP502 4.2 15.0 1.0 NH2 A:ARG296 4.2 19.0 1.0 O6 A:IMO503 4.3 15.4 1.0 OD2 A:ASP12 4.3 18.3 1.0 N A:HIS40 4.3 13.3 1.0 CB A:THR290 4.3 16.2 1.0 O2 A:IMO503 4.3 14.7 1.0 O2B A:GDP502 4.4 15.1 1.0 O5' A:GDP502 4.4 14.6 1.0 N1 A:IMO503 4.4 14.8 1.0 CA A:HIS40 4.6 14.0 1.0 C6 A:IMO503 4.8 15.2 1.0 NE2 A:HIS40 4.9 16.7 1.0 C A:ALA38 5.0 16.1 1.0 NZ A:LYS15 5.0 14.3 1.0

A.Bubic, Z.Stefanic, I.Lescic Asler, T.Pavkov-Keller. Adenylosuccinate Synthestase From H. Pylori in Complex with Hadacidin, Gdp and Imo To Be Published.