Magnesium in PDB 7alp: Severe Fever with Thrombocytopenia Syndrome Virus (Phenuiviridae) L Protein

All present enzymatic activity of Severe Fever with Thrombocytopenia Syndrome Virus (Phenuiviridae) L Protein:
2.7.7.48;

The binding sites of Magnesium atom in the Severe Fever with Thrombocytopenia Syndrome Virus (Phenuiviridae) L Protein (pdb code 7alp). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Severe Fever with Thrombocytopenia Syndrome Virus (Phenuiviridae) L Protein, PDB code: 7alp:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Severe Fever with Thrombocytopenia Syndrome Virus (Phenuiviridae) L Protein


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Severe Fever with Thrombocytopenia Syndrome Virus (Phenuiviridae) L Protein within 5.0Å range: probe atom residue distance (Å) B Occ U:Mg2101 b:79.4 occ:1.00 OD2 U:ASP1127 2.0 95.0 1.0 OD1 U:ASP1127 2.3 95.0 1.0 CG U:ASP1127 2.3 95.0 1.0 O U:ASN984 3.1 85.0 1.0 OE1 U:GLU1180 3.2 94.1 1.0 OE2 U:GLU1180 3.3 94.1 1.0 CD U:GLU1180 3.6 94.1 1.0 CB U:ASP1127 3.8 95.0 1.0 O U:GLU1180 4.0 94.1 1.0 O U:TYR1181 4.2 92.8 1.0 C U:ASN984 4.2 85.0 1.0 CB U:SER983 4.4 81.6 1.0 O U:SER983 4.5 81.6 1.0 C U:SER983 4.5 81.6 1.0 CA U:ASP1127 4.5 95.0 1.0 CB U:ASP985 4.6 101.4 1.0 O U:SER1128 4.6 82.1 1.0 N U:ASN984 4.7 85.0 1.0 N U:SER1128 4.8 82.1 1.0 CA U:SER983 4.9 81.6 1.0

Magnesium binding site 2 out of 2 in the Severe Fever with Thrombocytopenia Syndrome Virus (Phenuiviridae) L Protein


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Severe Fever with Thrombocytopenia Syndrome Virus (Phenuiviridae) L Protein within 5.0Å range: probe atom residue distance (Å) B Occ U:Mg2102 b:98.1 occ:1.00 CG U:MET671 2.5 89.9 1.0 CE U:MET671 3.5 89.9 1.0 CB U:MET671 3.6 89.9 1.0 SD U:MET671 3.6 89.9 1.0 CG2 U:THR1172 3.8 83.5 1.0 OE1 U:GLU1180 3.8 94.1 1.0 CD U:GLU1180 4.3 94.1 1.0 NE U:ARG667 4.3 87.4 1.0 NH2 U:ARG667 4.5 87.4 1.0 OG U:SER983 4.8 81.6 1.0 CG U:GLU1180 4.8 94.1 1.0 CE2 U:PHE1185 4.9 90.8 1.0 CB U:GLU1180 4.9 94.1 1.0 OE2 U:GLU1180 4.9 94.1 1.0 CZ U:ARG667 4.9 87.4 1.0 CA U:MET671 4.9 89.9 1.0

S.Cusack, M.Rosenthal. Errors in the Deposited Sftsv L Protein Structure Nat Microbiol 2021.
ISSN: ESSN 2058-5276
DOI: 10.1038/S41564-021-00901-3