Magnesium in PDB 7ask: 43S Preinitiation Complex From Trypanosoma Cruzi with the KDDX60 Helicase Bound with Atp

Magnesium Binding Sites:

The binding sites of Magnesium atom in the 43S Preinitiation Complex From Trypanosoma Cruzi with the KDDX60 Helicase Bound with Atp (pdb code 7ask). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the 43S Preinitiation Complex From Trypanosoma Cruzi with the KDDX60 Helicase Bound with Atp, PDB code: 7ask:

Magnesium binding site 1 out of 1 in 7ask

Go back to Magnesium Binding Sites List in 7ask
Magnesium binding site 1 out of 1 in the 43S Preinitiation Complex From Trypanosoma Cruzi with the KDDX60 Helicase Bound with Atp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of 43S Preinitiation Complex From Trypanosoma Cruzi with the KDDX60 Helicase Bound with Atp within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Mg2201

b:28.8
occ:1.00
OG1 F:THR1053 2.0 0.0 1.0
O1B F:ADP2202 2.8 31.1 1.0
O3B F:ADP2202 3.0 34.4 1.0
CE F:LYS1052 3.1 0.0 1.0
CB F:THR1053 3.2 0.0 1.0
PB F:ADP2202 3.4 30.7 1.0
NZ F:LYS1052 3.5 0.0 1.0
N F:THR1053 3.5 0.0 1.0
CD F:LYS1052 3.5 0.0 1.0
CB F:LYS1052 3.8 0.0 1.0
OD1 F:ASP1153 3.9 0.0 1.0
CA F:THR1053 3.9 0.0 1.0
N F:LYS1052 4.2 0.0 1.0
CG F:LYS1052 4.2 0.0 1.0
CG2 F:THR1053 4.4 0.0 1.0
O2B F:ADP2202 4.4 25.4 1.0
CA F:LYS1052 4.4 0.0 1.0
O3A F:ADP2202 4.6 31.3 1.0
C F:LYS1052 4.7 0.0 1.0
CG F:ASP1153 4.8 0.0 1.0
OD2 F:ASP1153 4.8 0.0 1.0

Reference:

A.Bochler, J.B.Querido, T.Prilepskaja, H.Soufari, A.Simonetti, L.Kuhn, A.R.Ribeiro, L.S.Valasek, Y.Hashem. Structural Differences in Translation Initiation Between Pathogenic Trypanosomatids and Their Mammalian Hosts Cell Rep 2020.
ISSN: ESSN 2211-1247
DOI: 10.1016/J.CELREP.2020.108534
Page generated: Sat Apr 17 16:42:17 2021

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