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Magnesium in PDB 7azv: Crystal Structure of A Shortened Ipgc Variant in Complex with 4- (Trifluoromethyl)Benzene-1-Carboximidamide

Protein crystallography data

The structure of Crystal Structure of A Shortened Ipgc Variant in Complex with 4- (Trifluoromethyl)Benzene-1-Carboximidamide, PDB code: 7azv was solved by M.Gardonyi, A.Heine, G.Klebe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.94 / 1.68
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 58.368, 58.368, 155.04, 90, 90, 120
R / Rfree (%) 17.9 / 20.8

Other elements in 7azv:

The structure of Crystal Structure of A Shortened Ipgc Variant in Complex with 4- (Trifluoromethyl)Benzene-1-Carboximidamide also contains other interesting chemical elements:

Fluorine (F) 6 atoms
Chlorine (Cl) 4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of A Shortened Ipgc Variant in Complex with 4- (Trifluoromethyl)Benzene-1-Carboximidamide (pdb code 7azv). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A Shortened Ipgc Variant in Complex with 4- (Trifluoromethyl)Benzene-1-Carboximidamide, PDB code: 7azv:

Magnesium binding site 1 out of 1 in 7azv

Go back to Magnesium Binding Sites List in 7azv
Magnesium binding site 1 out of 1 in the Crystal Structure of A Shortened Ipgc Variant in Complex with 4- (Trifluoromethyl)Benzene-1-Carboximidamide


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Shortened Ipgc Variant in Complex with 4- (Trifluoromethyl)Benzene-1-Carboximidamide within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg202

b:39.5
occ:1.00
O B:HOH379 2.0 38.9 1.0
O B:HOH373 2.1 36.2 1.0
O B:HOH312 2.2 30.2 1.0
O B:HOH366 2.2 36.0 1.0
O B:HOH331 2.3 33.4 1.0
HZ2 B:LYS140 3.1 29.0 1.0
O B:SER134 3.9 22.6 1.0
NZ B:LYS140 4.0 24.1 1.0
O B:HOH322 4.1 27.2 1.0
O B:GLN132 4.2 27.0 1.0
HZ1 B:LYS140 4.3 29.0 1.0
HZ3 B:LYS140 4.3 29.0 1.0
OD1 B:ASN135 4.4 39.5 1.0
O B:ILE131 4.4 22.5 1.0
HD2 B:LYS140 4.6 28.0 1.0
HE3 B:LYS140 4.7 28.6 1.0
HA B:ASN135 4.8 26.6 1.0
C B:GLN132 4.8 23.5 1.0
CE B:LYS140 4.9 23.8 1.0
C B:SER134 5.0 22.3 1.0
HA B:HIS133 5.0 28.6 1.0

Reference:

M.Gardonyi, A.Heine, G.Klebe. Crystal Structure of A Shortened Ipgc Variant in Complex with 4-(Trifluoromethyl)Benzene-1-Carboximidamide To Be Published.
Page generated: Wed Oct 2 10:15:26 2024

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