Atomistry » Magnesium » PDB 7bcz-7boh » 7bh2
Atomistry »
  Magnesium »
    PDB 7bcz-7boh »
      7bh2 »

Magnesium in PDB 7bh2: Cryo-Em Structure of Kdpfabc in E2PI State with BEF3 and K+

Enzymatic activity of Cryo-Em Structure of Kdpfabc in E2PI State with BEF3 and K+

All present enzymatic activity of Cryo-Em Structure of Kdpfabc in E2PI State with BEF3 and K+:
7.2.2.6;

Other elements in 7bh2:

The structure of Cryo-Em Structure of Kdpfabc in E2PI State with BEF3 and K+ also contains other interesting chemical elements:

Fluorine (F) 3 atoms
Potassium (K) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryo-Em Structure of Kdpfabc in E2PI State with BEF3 and K+ (pdb code 7bh2). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of Kdpfabc in E2PI State with BEF3 and K+, PDB code: 7bh2:

Magnesium binding site 1 out of 1 in 7bh2

Go back to Magnesium Binding Sites List in 7bh2
Magnesium binding site 1 out of 1 in the Cryo-Em Structure of Kdpfabc in E2PI State with BEF3 and K+


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Kdpfabc in E2PI State with BEF3 and K+ within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg802

b:77.4
occ:1.00
OD2 B:ASP307 2.1 84.8 1.0
O B:THR309 2.1 90.1 1.0
OD1 B:ASP518 2.4 83.8 1.0
F2 B:BEF803 2.5 89.8 1.0
CG B:ASP307 3.1 84.8 1.0
C B:THR309 3.4 90.1 1.0
HA3 B:GLY310 3.5 90.2 1.0
H B:GLY519 3.5 83.0 1.0
HB3 B:ASP307 3.5 84.8 1.0
CG B:ASP518 3.6 83.8 1.0
BE B:BEF803 3.7 89.8 1.0
HA3 B:GLY519 3.7 83.0 1.0
H B:ASP518 3.8 83.8 1.0
OD2 B:ASP522 3.9 84.1 1.0
OD1 B:ASP307 3.9 84.8 1.0
CB B:ASP307 3.9 84.8 1.0
HB B:THR309 4.0 90.1 1.0
N B:GLY519 4.0 83.0 1.0
H B:THR309 4.0 90.1 1.0
OD2 B:ASP518 4.2 83.8 1.0
H B:THR311 4.2 87.0 1.0
N B:GLY310 4.3 90.2 1.0
CA B:GLY310 4.3 90.2 1.0
HB2 B:ASP307 4.3 84.8 1.0
CA B:THR309 4.3 90.1 1.0
N B:THR309 4.3 90.1 1.0
CA B:GLY519 4.3 83.0 1.0
F3 B:BEF803 4.4 89.8 1.0
N B:ASP518 4.6 83.8 1.0
CB B:THR309 4.6 90.1 1.0
F1 B:BEF803 4.6 89.8 1.0
HA2 B:GLY519 4.7 83.0 1.0
N B:THR311 4.7 87.0 1.0
OG1 B:THR311 4.7 87.0 1.0
HG22 B:THR309 4.7 90.1 1.0
H B:LYS308 4.8 90.3 1.0
OD1 B:ASN521 4.8 86.3 1.0
C B:ASP518 4.8 83.8 1.0
CB B:ASP518 4.8 83.8 1.0
HG1 B:THR311 4.9 87.0 1.0
C B:GLY310 4.9 90.2 1.0
CG B:ASP522 4.9 84.1 1.0
HA3 B:GLY160 4.9 92.5 1.0
CA B:ASP518 4.9 83.8 1.0
HD21 B:ASN521 4.9 86.3 1.0

Reference:

M.E.Sweet, C.Larsen, B.P.Pedersen, D.L.Stokes. Cryo-Em Structure of Kdpfabc in E2-P State with BEF3 and K+ To Be Published.
Page generated: Wed Oct 2 10:26:48 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy