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Magnesium in PDB 7bti: Phalloidin Bound F-Actin Complex

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Phalloidin Bound F-Actin Complex (pdb code 7bti). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the Phalloidin Bound F-Actin Complex, PDB code: 7bti:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in 7bti

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Magnesium binding site 1 out of 5 in the Phalloidin Bound F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Phalloidin Bound F-Actin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg401

b:62.6
occ:1.00
O3B A:ADP402 2.1 66.1 1.0
PB A:ADP402 3.6 66.1 1.0
OD1 A:ASP154 3.6 69.0 1.0
OE1 A:GLN137 3.7 73.3 1.0
NE2 A:GLN137 3.9 73.3 1.0
O2B A:ADP402 4.0 66.1 1.0
CD A:GLN137 4.0 73.3 1.0
O2A A:ADP402 4.1 66.1 1.0
CA A:GLY156 4.2 64.9 1.0
OD2 A:ASP154 4.2 69.0 1.0
CG A:ASP154 4.3 69.0 1.0
O1B A:ADP402 4.4 66.1 1.0
O3A A:ADP402 4.5 66.1 1.0
N A:GLY156 4.6 64.9 1.0
CG2 A:VAL339 4.7 71.0 1.0
CA A:GLY301 4.8 66.4 1.0
OD2 A:ASP11 4.9 73.4 1.0
PA A:ADP402 4.9 66.1 1.0

Magnesium binding site 2 out of 5 in 7bti

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Magnesium binding site 2 out of 5 in the Phalloidin Bound F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Phalloidin Bound F-Actin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg401

b:47.3
occ:1.00
O2B B:ADP402 2.1 51.5 1.0
NE2 B:GLN137 2.7 53.1 1.0
CD B:GLN137 3.4 53.1 1.0
PB B:ADP402 3.6 51.5 1.0
OD1 B:ASP154 3.6 50.0 1.0
OD2 B:ASP154 4.1 50.0 1.0
OE1 B:GLN137 4.1 53.1 1.0
CG B:GLN137 4.1 53.1 1.0
O3B B:ADP402 4.2 51.5 1.0
O2A B:ADP402 4.2 51.5 1.0
O1B B:ADP402 4.3 51.5 1.0
CG B:ASP154 4.3 50.0 1.0
CG2 B:VAL339 4.3 54.2 1.0
OD2 B:ASP11 4.4 58.1 1.0
OD1 B:ASP11 4.5 58.1 1.0
O3A B:ADP402 4.5 51.5 1.0
PA B:ADP402 4.8 51.5 1.0
CG B:ASP11 4.9 58.1 1.0
CB B:VAL339 4.9 54.2 1.0

Magnesium binding site 3 out of 5 in 7bti

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Magnesium binding site 3 out of 5 in the Phalloidin Bound F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Phalloidin Bound F-Actin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg401

b:44.2
occ:1.00
O3B C:ADP402 2.1 46.7 1.0
OE1 C:GLN137 3.0 45.7 1.0
PB C:ADP402 3.4 46.7 1.0
O2B C:ADP402 3.6 46.7 1.0
CD C:GLN137 3.7 45.7 1.0
NE2 C:GLN137 3.8 45.7 1.0
OD2 C:ASP11 4.0 51.6 1.0
OD1 C:ASP11 4.1 51.6 1.0
O1B C:ADP402 4.3 46.7 1.0
OD2 C:ASP154 4.4 43.8 1.0
O2A C:ADP402 4.4 46.7 1.0
CG2 C:VAL339 4.4 49.5 1.0
O3A C:ADP402 4.5 46.7 1.0
CG C:ASP11 4.5 51.6 1.0
O1A C:ADP402 4.7 46.7 1.0
CB C:VAL339 4.7 49.5 1.0
PA C:ADP402 4.8 46.7 1.0
CE C:LYS18 4.8 47.1 1.0
OD1 C:ASP154 4.8 43.8 1.0
CG C:GLN137 4.9 45.7 1.0
O C:SER155 5.0 44.3 1.0

Magnesium binding site 4 out of 5 in 7bti

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Magnesium binding site 4 out of 5 in the Phalloidin Bound F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Phalloidin Bound F-Actin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg401

b:38.1
occ:1.00
O2B D:ADP402 2.1 49.2 1.0
NE2 D:GLN137 3.3 45.9 1.0
PB D:ADP402 3.5 49.2 1.0
OE1 D:GLN137 3.5 45.9 1.0
CD D:GLN137 3.7 45.9 1.0
OD2 D:ASP154 3.9 44.9 1.0
O1B D:ADP402 4.0 49.2 1.0
O3B D:ADP402 4.1 49.2 1.0
OD2 D:ASP11 4.1 53.3 1.0
OD1 D:ASP11 4.3 53.3 1.0
O D:SER155 4.3 45.1 1.0
OD1 D:ASP154 4.5 44.9 1.0
O2A D:ADP402 4.6 49.2 1.0
CG D:ASP154 4.6 44.9 1.0
CG D:ASP11 4.6 53.3 1.0
CG2 D:VAL339 4.6 48.5 1.0
O3A D:ADP402 4.6 49.2 1.0
CG D:GLN137 4.9 45.9 1.0

Magnesium binding site 5 out of 5 in 7bti

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Magnesium binding site 5 out of 5 in the Phalloidin Bound F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Phalloidin Bound F-Actin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg401

b:40.1
occ:1.00
O2B E:ADP402 2.1 49.0 1.0
OD2 E:ASP154 3.5 47.8 1.0
PB E:ADP402 3.5 49.0 1.0
NE2 E:GLN137 3.7 48.6 1.0
OE1 E:GLN137 3.8 48.6 1.0
O3B E:ADP402 4.0 49.0 1.0
O2A E:ADP402 4.0 49.0 1.0
CD E:GLN137 4.0 48.6 1.0
O E:SER155 4.0 48.4 1.0
OD2 E:ASP11 4.3 55.6 1.0
O3A E:ADP402 4.4 49.0 1.0
O1B E:ADP402 4.4 49.0 1.0
CG E:ASP154 4.5 47.8 1.0
OD1 E:ASP11 4.6 55.6 1.0
CG2 E:VAL339 4.7 51.0 1.0
PA E:ADP402 4.7 49.0 1.0
OD1 E:ASP154 4.7 47.8 1.0
CG E:ASP11 4.9 55.6 1.0
CE E:LYS18 5.0 51.4 1.0

Reference:

A.Kumari, V.K.Ragunath, M.Sirajuddin. Structural Insights Into Filament Recognition By Cellular Actin Markers To Be Published.
Page generated: Wed Oct 2 13:34:27 2024

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