Magnesium in PDB 7bti: Phalloidin Bound F-Actin Complex
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Phalloidin Bound F-Actin Complex
(pdb code 7bti). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the
Phalloidin Bound F-Actin Complex, PDB code: 7bti:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
Magnesium binding site 1 out
of 5 in 7bti
Go back to
Magnesium Binding Sites List in 7bti
Magnesium binding site 1 out
of 5 in the Phalloidin Bound F-Actin Complex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Phalloidin Bound F-Actin Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg401
b:62.6
occ:1.00
|
O3B
|
A:ADP402
|
2.1
|
66.1
|
1.0
|
PB
|
A:ADP402
|
3.6
|
66.1
|
1.0
|
OD1
|
A:ASP154
|
3.6
|
69.0
|
1.0
|
OE1
|
A:GLN137
|
3.7
|
73.3
|
1.0
|
NE2
|
A:GLN137
|
3.9
|
73.3
|
1.0
|
O2B
|
A:ADP402
|
4.0
|
66.1
|
1.0
|
CD
|
A:GLN137
|
4.0
|
73.3
|
1.0
|
O2A
|
A:ADP402
|
4.1
|
66.1
|
1.0
|
CA
|
A:GLY156
|
4.2
|
64.9
|
1.0
|
OD2
|
A:ASP154
|
4.2
|
69.0
|
1.0
|
CG
|
A:ASP154
|
4.3
|
69.0
|
1.0
|
O1B
|
A:ADP402
|
4.4
|
66.1
|
1.0
|
O3A
|
A:ADP402
|
4.5
|
66.1
|
1.0
|
N
|
A:GLY156
|
4.6
|
64.9
|
1.0
|
CG2
|
A:VAL339
|
4.7
|
71.0
|
1.0
|
CA
|
A:GLY301
|
4.8
|
66.4
|
1.0
|
OD2
|
A:ASP11
|
4.9
|
73.4
|
1.0
|
PA
|
A:ADP402
|
4.9
|
66.1
|
1.0
|
|
Magnesium binding site 2 out
of 5 in 7bti
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Magnesium Binding Sites List in 7bti
Magnesium binding site 2 out
of 5 in the Phalloidin Bound F-Actin Complex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Phalloidin Bound F-Actin Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg401
b:47.3
occ:1.00
|
O2B
|
B:ADP402
|
2.1
|
51.5
|
1.0
|
NE2
|
B:GLN137
|
2.7
|
53.1
|
1.0
|
CD
|
B:GLN137
|
3.4
|
53.1
|
1.0
|
PB
|
B:ADP402
|
3.6
|
51.5
|
1.0
|
OD1
|
B:ASP154
|
3.6
|
50.0
|
1.0
|
OD2
|
B:ASP154
|
4.1
|
50.0
|
1.0
|
OE1
|
B:GLN137
|
4.1
|
53.1
|
1.0
|
CG
|
B:GLN137
|
4.1
|
53.1
|
1.0
|
O3B
|
B:ADP402
|
4.2
|
51.5
|
1.0
|
O2A
|
B:ADP402
|
4.2
|
51.5
|
1.0
|
O1B
|
B:ADP402
|
4.3
|
51.5
|
1.0
|
CG
|
B:ASP154
|
4.3
|
50.0
|
1.0
|
CG2
|
B:VAL339
|
4.3
|
54.2
|
1.0
|
OD2
|
B:ASP11
|
4.4
|
58.1
|
1.0
|
OD1
|
B:ASP11
|
4.5
|
58.1
|
1.0
|
O3A
|
B:ADP402
|
4.5
|
51.5
|
1.0
|
PA
|
B:ADP402
|
4.8
|
51.5
|
1.0
|
CG
|
B:ASP11
|
4.9
|
58.1
|
1.0
|
CB
|
B:VAL339
|
4.9
|
54.2
|
1.0
|
|
Magnesium binding site 3 out
of 5 in 7bti
Go back to
Magnesium Binding Sites List in 7bti
Magnesium binding site 3 out
of 5 in the Phalloidin Bound F-Actin Complex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Phalloidin Bound F-Actin Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg401
b:44.2
occ:1.00
|
O3B
|
C:ADP402
|
2.1
|
46.7
|
1.0
|
OE1
|
C:GLN137
|
3.0
|
45.7
|
1.0
|
PB
|
C:ADP402
|
3.4
|
46.7
|
1.0
|
O2B
|
C:ADP402
|
3.6
|
46.7
|
1.0
|
CD
|
C:GLN137
|
3.7
|
45.7
|
1.0
|
NE2
|
C:GLN137
|
3.8
|
45.7
|
1.0
|
OD2
|
C:ASP11
|
4.0
|
51.6
|
1.0
|
OD1
|
C:ASP11
|
4.1
|
51.6
|
1.0
|
O1B
|
C:ADP402
|
4.3
|
46.7
|
1.0
|
OD2
|
C:ASP154
|
4.4
|
43.8
|
1.0
|
O2A
|
C:ADP402
|
4.4
|
46.7
|
1.0
|
CG2
|
C:VAL339
|
4.4
|
49.5
|
1.0
|
O3A
|
C:ADP402
|
4.5
|
46.7
|
1.0
|
CG
|
C:ASP11
|
4.5
|
51.6
|
1.0
|
O1A
|
C:ADP402
|
4.7
|
46.7
|
1.0
|
CB
|
C:VAL339
|
4.7
|
49.5
|
1.0
|
PA
|
C:ADP402
|
4.8
|
46.7
|
1.0
|
CE
|
C:LYS18
|
4.8
|
47.1
|
1.0
|
OD1
|
C:ASP154
|
4.8
|
43.8
|
1.0
|
CG
|
C:GLN137
|
4.9
|
45.7
|
1.0
|
O
|
C:SER155
|
5.0
|
44.3
|
1.0
|
|
Magnesium binding site 4 out
of 5 in 7bti
Go back to
Magnesium Binding Sites List in 7bti
Magnesium binding site 4 out
of 5 in the Phalloidin Bound F-Actin Complex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Phalloidin Bound F-Actin Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg401
b:38.1
occ:1.00
|
O2B
|
D:ADP402
|
2.1
|
49.2
|
1.0
|
NE2
|
D:GLN137
|
3.3
|
45.9
|
1.0
|
PB
|
D:ADP402
|
3.5
|
49.2
|
1.0
|
OE1
|
D:GLN137
|
3.5
|
45.9
|
1.0
|
CD
|
D:GLN137
|
3.7
|
45.9
|
1.0
|
OD2
|
D:ASP154
|
3.9
|
44.9
|
1.0
|
O1B
|
D:ADP402
|
4.0
|
49.2
|
1.0
|
O3B
|
D:ADP402
|
4.1
|
49.2
|
1.0
|
OD2
|
D:ASP11
|
4.1
|
53.3
|
1.0
|
OD1
|
D:ASP11
|
4.3
|
53.3
|
1.0
|
O
|
D:SER155
|
4.3
|
45.1
|
1.0
|
OD1
|
D:ASP154
|
4.5
|
44.9
|
1.0
|
O2A
|
D:ADP402
|
4.6
|
49.2
|
1.0
|
CG
|
D:ASP154
|
4.6
|
44.9
|
1.0
|
CG
|
D:ASP11
|
4.6
|
53.3
|
1.0
|
CG2
|
D:VAL339
|
4.6
|
48.5
|
1.0
|
O3A
|
D:ADP402
|
4.6
|
49.2
|
1.0
|
CG
|
D:GLN137
|
4.9
|
45.9
|
1.0
|
|
Magnesium binding site 5 out
of 5 in 7bti
Go back to
Magnesium Binding Sites List in 7bti
Magnesium binding site 5 out
of 5 in the Phalloidin Bound F-Actin Complex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Phalloidin Bound F-Actin Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg401
b:40.1
occ:1.00
|
O2B
|
E:ADP402
|
2.1
|
49.0
|
1.0
|
OD2
|
E:ASP154
|
3.5
|
47.8
|
1.0
|
PB
|
E:ADP402
|
3.5
|
49.0
|
1.0
|
NE2
|
E:GLN137
|
3.7
|
48.6
|
1.0
|
OE1
|
E:GLN137
|
3.8
|
48.6
|
1.0
|
O3B
|
E:ADP402
|
4.0
|
49.0
|
1.0
|
O2A
|
E:ADP402
|
4.0
|
49.0
|
1.0
|
CD
|
E:GLN137
|
4.0
|
48.6
|
1.0
|
O
|
E:SER155
|
4.0
|
48.4
|
1.0
|
OD2
|
E:ASP11
|
4.3
|
55.6
|
1.0
|
O3A
|
E:ADP402
|
4.4
|
49.0
|
1.0
|
O1B
|
E:ADP402
|
4.4
|
49.0
|
1.0
|
CG
|
E:ASP154
|
4.5
|
47.8
|
1.0
|
OD1
|
E:ASP11
|
4.6
|
55.6
|
1.0
|
CG2
|
E:VAL339
|
4.7
|
51.0
|
1.0
|
PA
|
E:ADP402
|
4.7
|
49.0
|
1.0
|
OD1
|
E:ASP154
|
4.7
|
47.8
|
1.0
|
CG
|
E:ASP11
|
4.9
|
55.6
|
1.0
|
CE
|
E:LYS18
|
5.0
|
51.4
|
1.0
|
|
Reference:
A.Kumari,
V.K.Ragunath,
M.Sirajuddin.
Structural Insights Into Filament Recognition By Cellular Actin Markers To Be Published.
Page generated: Wed Oct 2 13:34:27 2024
|