Magnesium in PDB 7bzc: Crystal Structure of Plant Sesterterpene Synthase ATTPS18 Complexed with Farnesyl Thiolodiphosphate (Fspp)

The structure of Crystal Structure of Plant Sesterterpene Synthase ATTPS18 Complexed with Farnesyl Thiolodiphosphate (Fspp), PDB code: 7bzc was solved by J.X.Li, G.D.Wang, P.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	34.45 / 2.30
Space group	P 21 2 21
Cell size a, b, c (Å), α, β, γ (°)	64.388, 81.537, 125.570, 90.00, 90.00, 90.00
R / Rfree (%)	20.2 / 24.3

The binding sites of Magnesium atom in the Crystal Structure of Plant Sesterterpene Synthase ATTPS18 Complexed with Farnesyl Thiolodiphosphate (Fspp) (pdb code 7bzc). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Plant Sesterterpene Synthase ATTPS18 Complexed with Farnesyl Thiolodiphosphate (Fspp), PDB code: 7bzc:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of Plant Sesterterpene Synthase ATTPS18 Complexed with Farnesyl Thiolodiphosphate (Fspp)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Plant Sesterterpene Synthase ATTPS18 Complexed with Farnesyl Thiolodiphosphate (Fspp) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg601 b:50.9 occ:1.00 OD1 A:ASP451 2.4 38.7 1.0 O2B A:FPS603 2.5 73.2 1.0 OE2 A:GLU458 2.5 50.6 1.0 O2A A:FPS603 2.7 64.8 1.0 OD1 A:ASN450 2.8 45.7 1.0 CG A:ASP451 3.5 32.8 1.0 NH2 A:ARG447 3.6 37.4 1.0 CD A:GLU458 3.7 49.0 1.0 PB A:FPS603 3.9 97.1 1.0 CG A:ASN450 4.0 39.1 1.0 PA A:FPS603 4.0 100.0 1.0 CA A:ASP451 4.2 34.9 1.0 CB A:ASP451 4.3 29.1 1.0 O3A A:FPS603 4.3 87.8 1.0 OG1 A:THR454 4.3 41.2 1.0 O3B A:FPS603 4.4 85.9 1.0 OD2 A:ASP451 4.4 34.2 1.0 CZ A:ARG447 4.4 37.5 1.0 OE1 A:GLU458 4.5 43.2 1.0 O1A A:FPS603 4.5 81.9 1.0 N A:ASP451 4.5 29.0 1.0 NE A:ARG447 4.7 42.5 1.0 C A:ASN450 4.7 32.4 1.0 CG A:GLU458 4.8 47.7 1.0 ND2 A:ASN450 4.8 42.4 1.0 O A:ASN450 4.8 37.0 1.0 OH A:TYR399 4.9 39.2 1.0 OE1 A:GLU463 4.9 69.7 1.0 CB A:ASN450 5.0 31.1 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of Plant Sesterterpene Synthase ATTPS18 Complexed with Farnesyl Thiolodiphosphate (Fspp)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Plant Sesterterpene Synthase ATTPS18 Complexed with Farnesyl Thiolodiphosphate (Fspp) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg602 b:48.1 occ:1.00 O A:TYR309 2.2 41.5 1.0 O A:ASP306 2.8 35.6 1.0 C A:TYR309 3.4 39.3 1.0 C A:ASP306 3.9 32.8 1.0 NH1 A:ARG461 4.0 76.3 1.0 OE2 A:GLU463 4.1 63.0 1.0 OD1 A:ASP306 4.1 50.1 1.0 CB A:TYR309 4.2 34.5 1.0 OD2 A:ASP306 4.2 47.3 1.0 CA A:TYR309 4.3 34.7 1.0 CG A:ASP306 4.3 51.3 1.0 CA A:ASP307 4.4 38.1 1.0 N A:ASP310 4.4 39.7 1.0 CD A:GLU463 4.5 65.7 1.0 N A:TYR309 4.5 30.0 1.0 N A:ASP307 4.6 33.5 1.0 CA A:ASP310 4.6 39.2 1.0 C A:ASP307 4.6 36.2 1.0 OE1 A:GLU463 4.7 69.7 1.0 O A:ASP307 4.8 38.1 1.0 CA A:ASP306 4.9 35.3 1.0 O3B A:FPS603 5.0 85.9 1.0

Q.Chen, J.Li, Z.Liu, T.Mitsuhashi, Y.Zhang, H.Liu, Y.Ma, J.He, T.Shinada, T.Sato, Y.Wang, H.Liu, I.Abe, P.Zhang, G.Wang. Molecular Basis For Sesterterpene Diversity Produced By Plant Terpene Synthases Plant Commun. 2020.
ISSN: ISSN 2590-3462
DOI: 10.1016/J.XPLC.2020.100051