Magnesium in PDB 7ch8: Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V

Other elements in 7ch8:

The structure of Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V also contains other interesting chemical elements:

Vanadium (V) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V (pdb code 7ch8). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V, PDB code: 7ch8:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7ch8

Go back to Magnesium Binding Sites List in 7ch8
Magnesium binding site 1 out of 2 in the Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Mg302

b:88.0
occ:1.00
O2G I:AD9301 2.2 79.1 1.0
O3G I:AD9301 2.2 79.1 1.0
OG1 I:THR48 2.2 63.5 1.0
VG I:AD9301 2.6 79.1 1.0
CB I:THR48 2.6 63.5 1.0
O3A I:AD9301 2.6 79.1 1.0
O3B I:AD9301 3.1 79.1 1.0
CG2 I:THR48 3.2 63.5 1.0
PB I:AD9301 3.2 79.1 1.0
O2B I:AD9301 3.3 79.1 1.0
PA I:AD9301 3.9 79.1 1.0
CA I:THR48 4.0 63.5 1.0
O1G I:AD9301 4.0 79.1 1.0
O2A I:AD9301 4.1 79.1 1.0
N I:THR48 4.3 63.5 1.0
O1A I:AD9301 4.4 79.1 1.0
O1B I:AD9301 4.7 79.1 1.0
NE2 I:GLN92 4.7 36.9 1.0
OD1 I:ASP169 4.8 43.8 1.0
C I:THR48 5.0 63.5 1.0

Magnesium binding site 2 out of 2 in 7ch8

Go back to Magnesium Binding Sites List in 7ch8
Magnesium binding site 2 out of 2 in the Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Mg302

b:67.8
occ:1.00
O1G J:AD9301 2.2 76.5 1.0
OG1 J:THR48 2.2 59.5 1.0
O2B J:AD9301 2.2 76.5 1.0
O3G J:AD9301 2.2 76.5 1.0
VG J:AD9301 2.6 76.5 1.0
CB J:THR48 2.9 59.5 1.0
PB J:AD9301 3.0 76.5 1.0
O3A J:AD9301 3.0 76.5 1.0
O3B J:AD9301 3.2 76.5 1.0
N J:THR48 3.8 59.5 1.0
CA J:THR48 3.9 59.5 1.0
O2G J:AD9301 4.0 76.5 1.0
CG2 J:THR48 4.0 59.5 1.0
PA J:AD9301 4.1 76.5 1.0
O1A J:AD9301 4.4 76.5 1.0
O2A J:AD9301 4.4 76.5 1.0
O1B J:AD9301 4.4 76.5 1.0
OD1 J:ASP169 4.5 41.7 1.0
NZ J:LYS47 4.8 64.1 1.0
CB J:LYS47 4.9 64.1 1.0
C J:LYS47 4.9 64.1 1.0
NE2 J:GLN92 5.0 36.6 1.0

Reference:

C.Zhou, H.Shi, M.Zhang, L.Zhou, L.Xiao, S.Feng, W.Im, M.Zhou, X.Zhang, Y.Huang. Structural Insight Into Phospholipid Transport By the Mlafebd Complex From P. Aeruginosa. J.Mol.Biol. V. 433 66986 2021.
ISSN: ESSN 1089-8638
PubMed: 33845086
DOI: 10.1016/J.JMB.2021.166986
Page generated: Fri Nov 5 15:08:31 2021

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