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Magnesium in PDB 7ckv: Crystal Structure of Cyanobacteriochrome Gaf Domain in Pr State

Protein crystallography data

The structure of Crystal Structure of Cyanobacteriochrome Gaf Domain in Pr State, PDB code: 7ckv was solved by T.Nagae, T.Koizumi, Y.Hirose, M.Mishima, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.66 / 1.63
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 35.73, 101.334, 41.81, 90, 91.79, 90
R / Rfree (%) 15.8 / 19.9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Cyanobacteriochrome Gaf Domain in Pr State (pdb code 7ckv). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Cyanobacteriochrome Gaf Domain in Pr State, PDB code: 7ckv:

Magnesium binding site 1 out of 1 in 7ckv

Go back to Magnesium Binding Sites List in 7ckv
Magnesium binding site 1 out of 1 in the Crystal Structure of Cyanobacteriochrome Gaf Domain in Pr State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Cyanobacteriochrome Gaf Domain in Pr State within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg402

b:46.8
occ:1.00
O B:HOH660 2.0 44.5 1.0
O B:HOH556 2.4 30.5 1.0
O B:HOH633 2.4 35.6 1.0
O B:HOH503 2.6 47.2 1.0
O B:HOH516 3.8 26.0 1.0
O B:PRO204 4.3 20.9 1.0
O B:ASP205 4.3 20.4 1.0
C B:ASP205 4.7 20.3 1.0
CA B:ASP205 4.8 19.3 1.0

Reference:

T.Nagae, Y.Hirose, M.Mishima. Crystal Structure of Cyanobacteriochrome Gaf Domain in Pr State To Be Published.
Page generated: Wed Oct 2 14:11:43 2024

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