Magnesium in PDB 7coq: Hexameric Ring Complex of Engineered V1-Atpase Bound to Amp-Pnp: A3(De)3_(Anp)1CAT

All present enzymatic activity of Hexameric Ring Complex of Engineered V1-Atpase Bound to Amp-Pnp: A3(De)3_(Anp)1CAT:
7.2.2.1;

The structure of Hexameric Ring Complex of Engineered V1-Atpase Bound to Amp-Pnp: A3(De)3_(Anp)1CAT, PDB code: 7coq was solved by T.Kosugi, M.Tanabe, N.Koga, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.34 / 3.44
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	124.445, 124.486, 131.339, 90, 93.03, 90
R / Rfree (%)	21.3 / 24.8

The binding sites of Magnesium atom in the Hexameric Ring Complex of Engineered V1-Atpase Bound to Amp-Pnp: A3(De)3_(Anp)1CAT (pdb code 7coq). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Hexameric Ring Complex of Engineered V1-Atpase Bound to Amp-Pnp: A3(De)3_(Anp)1CAT, PDB code: 7coq:

Magnesium binding site 1 out of 1 in the Hexameric Ring Complex of Engineered V1-Atpase Bound to Amp-Pnp: A3(De)3_(Anp)1CAT


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Hexameric Ring Complex of Engineered V1-Atpase Bound to Amp-Pnp: A3(De)3_(Anp)1CAT within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg601 b:68.4 occ:1.00 OG1 C:THR239 2.0 71.1 1.0 O2G C:ANP602 2.1 80.8 1.0 OE2 C:GLU261 2.7 97.4 1.0 O2B C:ANP602 2.8 80.7 1.0 PG C:ANP602 3.0 98.0 1.0 OE2 C:GLU265 3.0 78.6 1.0 O1G C:ANP602 3.1 103.9 1.0 CB C:THR239 3.1 79.0 1.0 N3B C:ANP602 3.5 76.8 1.0 CG2 C:THR239 3.5 80.6 1.0 OE1 C:GLU265 3.6 88.8 1.0 PB C:ANP602 3.7 89.5 1.0 CD C:GLU265 3.7 85.0 1.0 NE C:ARG262 3.8 86.0 1.0 CD C:GLU261 3.9 90.9 1.0 NH2 C:ARG262 4.0 81.0 1.0 O1A C:ANP602 4.0 84.7 1.0 CZ C:ARG262 4.3 77.7 1.0 O3A C:ANP602 4.4 91.0 1.0 CA C:THR239 4.4 83.2 1.0 O3G C:ANP602 4.4 86.4 1.0 OD1 C:ASP329 4.4 76.0 1.0 PA C:ANP602 4.5 78.5 1.0 NH1 F:ARG350 4.6 89.1 1.0 O2A C:ANP602 4.6 81.7 1.0 N C:THR239 4.7 91.5 1.0 OE1 C:GLU261 4.8 85.6 1.0 CD C:ARG262 4.8 87.7 1.0 CG C:GLU261 4.8 84.9 1.0 OD2 C:ASP329 4.9 83.5 1.0 O1B C:ANP602 4.9 91.3 1.0 CG C:ASP329 5.0 77.6 1.0

T.Kosugi, T.Iida, M.Tanabe, R.Iino, N.Koga. De Novo Design of Allosteric Control Into Rotary Motor V1-Atpase By Restoring Lost Function To Be Published.