Magnesium in PDB 7d9s: Structure of Huamn Soluble Guanylate Cyclase in the YC1 and No-Bound State

All present enzymatic activity of Structure of Huamn Soluble Guanylate Cyclase in the YC1 and No-Bound State:
4.6.1.2;

The structure of Structure of Huamn Soluble Guanylate Cyclase in the YC1 and No-Bound State also contains other interesting chemical elements:

Iron

(Fe)

1 atom

The binding sites of Magnesium atom in the Structure of Huamn Soluble Guanylate Cyclase in the YC1 and No-Bound State (pdb code 7d9s). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of Huamn Soluble Guanylate Cyclase in the YC1 and No-Bound State, PDB code: 7d9s:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of Huamn Soluble Guanylate Cyclase in the YC1 and No-Bound State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Huamn Soluble Guanylate Cyclase in the YC1 and No-Bound State within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg701 b:30.0 occ:1.00 MG A:MG702 2.2 30.0 1.0 C3A B:G2P703 2.3 118.1 1.0 OD1 A:ASP486 2.4 114.0 1.0 OD2 A:ASP530 2.5 110.8 1.0 O3B B:G2P703 2.6 118.1 1.0 O5' B:G2P703 2.8 118.1 1.0 PA B:G2P703 2.8 118.1 1.0 PB B:G2P703 2.9 118.1 1.0 CG A:ASP486 3.0 114.0 1.0 OD2 A:ASP486 3.1 114.0 1.0 O1A B:G2P703 3.2 118.1 1.0 CG A:ASP530 3.4 110.8 1.0 O2B B:G2P703 3.5 118.1 1.0 OD1 A:ASP530 3.6 110.8 1.0 O A:ILE487 4.0 116.9 1.0 C5' B:G2P703 4.0 118.1 1.0 PG B:G2P703 4.1 118.1 1.0 O2A B:G2P703 4.3 118.1 1.0 CB A:ASP486 4.3 114.0 1.0 O1B B:G2P703 4.3 118.1 1.0 O1G B:G2P703 4.4 118.1 1.0 O2G B:G2P703 4.4 118.1 1.0 CB A:ASP530 4.7 110.8 1.0

Magnesium binding site 2 out of 2 in the Structure of Huamn Soluble Guanylate Cyclase in the YC1 and No-Bound State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of Huamn Soluble Guanylate Cyclase in the YC1 and No-Bound State within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg702 b:30.0 occ:1.00 O A:ILE487 2.0 116.9 1.0 O2B B:G2P703 2.1 118.1 1.0 MG A:MG701 2.2 30.0 1.0 O3B B:G2P703 2.3 118.1 1.0 OD2 A:ASP486 2.3 114.0 1.0 OD1 A:ASP486 2.5 114.0 1.0 PB B:G2P703 2.5 118.1 1.0 O1G B:G2P703 2.7 118.1 1.0 CG A:ASP486 2.7 114.0 1.0 C3A B:G2P703 3.1 118.1 1.0 PG B:G2P703 3.2 118.1 1.0 C A:ILE487 3.3 116.9 1.0 OD2 A:ASP530 3.4 110.8 1.0 O2G B:G2P703 4.0 118.1 1.0 CA A:VAL488 4.0 120.9 1.0 O1B B:G2P703 4.0 118.1 1.0 N A:VAL488 4.0 120.9 1.0 N A:ILE487 4.1 116.9 1.0 CB A:ASP486 4.2 114.0 1.0 O3G B:G2P703 4.3 118.1 1.0 CA A:ILE487 4.3 116.9 1.0 PA B:G2P703 4.4 118.1 1.0 O1A B:G2P703 4.4 118.1 1.0 NH2 A:ARG574 4.5 118.9 1.0 CG A:ASP530 4.5 110.8 1.0 N A:GLY489 4.5 123.3 1.0 CB A:PHE490 4.5 121.8 1.0 C A:ASP486 4.6 114.0 1.0 C A:VAL488 4.6 120.9 1.0 N A:PHE490 4.6 121.8 1.0 CG1 A:ILE487 4.7 116.9 1.0 O5' B:G2P703 4.9 118.1 1.0 CA A:ASP486 5.0 114.0 1.0

L.Chen, R.Liu, Y.Kang. Structure of Huamn Soluble Guanylate Cyclase in the YC1 and No-Bound State To Be Published.