Magnesium in PDB 7dmz: Gmpcpp Microtubule Complex

The binding sites of Magnesium atom in the Gmpcpp Microtubule Complex (pdb code 7dmz). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Gmpcpp Microtubule Complex, PDB code: 7dmz:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Gmpcpp Microtubule Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Gmpcpp Microtubule Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:85.8 occ:1.00 O2G A:GTP501 2.1 83.9 1.0 O3G A:GTP501 2.1 83.9 1.0 O1B A:GTP501 2.1 83.9 1.0 PG A:GTP501 2.4 83.9 1.0 PB A:GTP501 3.1 83.9 1.0 O3B A:GTP501 3.1 83.9 1.0 OE1 A:GLN11 3.3 80.2 1.0 OE2 A:GLU71 3.6 86.0 1.0 O3A A:GTP501 3.8 83.9 1.0 O1G A:GTP501 3.8 83.9 1.0 CB A:GLN11 4.2 80.2 1.0 O2B A:GTP501 4.4 83.9 1.0 CD A:GLN11 4.4 80.2 1.0 CD A:GLU71 4.8 86.0 1.0 O1A A:GTP501 4.8 83.9 1.0 CG A:GLN11 4.9 80.2 1.0 PA A:GTP501 4.9 83.9 1.0 CG2 A:THR145 4.9 74.4 1.0

Magnesium binding site 2 out of 2 in the Gmpcpp Microtubule Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Gmpcpp Microtubule Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg502 b:67.7 occ:1.00 O1B B:GTP501 2.1 62.1 1.0 O2G B:GTP501 2.1 62.1 1.0 O3B B:GTP501 2.1 62.1 1.0 PG B:GTP501 2.4 62.1 1.0 PB B:GTP501 2.5 62.1 1.0 CG2 B:THR145 2.5 59.5 1.0 O3G B:GTP501 3.0 62.1 1.0 O2B B:GTP501 3.3 62.1 1.0 O1G B:GTP501 3.8 62.1 1.0 O3A B:GTP501 3.9 62.1 1.0 CB B:THR145 4.0 59.5 1.0 OD1 B:ASP69 4.0 61.5 1.0 OD2 B:ASP69 4.1 61.5 1.0 N B:GLN11 4.3 58.3 1.0 CG B:ASP69 4.5 61.5 1.0 CB B:GLN11 4.5 58.3 1.0 N B:THR145 4.5 59.5 1.0 CA B:GLY10 4.8 62.6 1.0 N B:GLY146 4.8 60.8 1.0 CA B:THR145 4.8 59.5 1.0 OG1 B:THR145 4.8 59.5 1.0 O2A B:GTP501 4.9 62.1 1.0 PA B:GTP501 4.9 62.1 1.0 C B:GLY10 5.0 62.6 1.0 CA B:GLN11 5.0 58.3 1.0

Y.X.Wang, Y.X.Wang. N/A N/A.