Magnesium in PDB 7dpi: Plasmodium Falciparum Cytoplasmic Phenylalanyl-Trna Synthetase in Complex with BRD7929

All present enzymatic activity of Plasmodium Falciparum Cytoplasmic Phenylalanyl-Trna Synthetase in Complex with BRD7929:
6.1.1.20;

The structure of Plasmodium Falciparum Cytoplasmic Phenylalanyl-Trna Synthetase in Complex with BRD7929, PDB code: 7dpi was solved by S.Manmohan, N.Malhotra, K.Harlos, Y.Manickam, A.Sharma, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	66.14 / 3.60
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	86.648, 108.034, 140.532, 90, 105.11, 90
R / Rfree (%)	29.4 / 33

The binding sites of Magnesium atom in the Plasmodium Falciparum Cytoplasmic Phenylalanyl-Trna Synthetase in Complex with BRD7929 (pdb code 7dpi). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Plasmodium Falciparum Cytoplasmic Phenylalanyl-Trna Synthetase in Complex with BRD7929, PDB code: 7dpi:

Magnesium binding site 1 out of 1 in the Plasmodium Falciparum Cytoplasmic Phenylalanyl-Trna Synthetase in Complex with BRD7929


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Plasmodium Falciparum Cytoplasmic Phenylalanyl-Trna Synthetase in Complex with BRD7929 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg701 b:88.8 occ:1.00 OE1 B:GLU367 1.8 86.0 1.0 O A:GLU505 1.9 93.5 1.0 CD B:GLU367 2.5 69.7 1.0 OD1 B:ASP364 2.7 79.2 1.0 OE2 B:GLU367 2.7 76.4 1.0 C A:GLU505 2.8 106.5 1.0 CA A:GLU505 3.2 111.8 1.0 CG B:ASP364 3.7 76.3 1.0 CB A:GLU505 3.7 116.5 1.0 CG B:GLU367 3.9 57.6 1.0 N A:PRO506 4.0 96.9 1.0 ND2 B:ASN54 4.1 119.4 1.0 CB B:GLU367 4.3 57.8 1.0 O A:THR504 4.4 64.6 1.0 OD2 B:ASP364 4.4 80.8 1.0 CA A:PRO506 4.5 85.2 1.0 N A:GLU505 4.6 122.2 1.0 CB B:ASP364 4.6 55.1 1.0 O A:ASN501 4.7 101.2 1.0 CA B:ASP364 4.7 54.5 1.0 CG A:GLU505 4.9 105.0 1.0 O A:THR499 4.9 53.1 1.0 N A:ASN501 4.9 82.9 1.0 C A:THR504 4.9 98.0 1.0 CA A:PHE500 5.0 85.2 1.0

S.Manmohan, N.Malhotra, K.Harlos, Y.Manickam, A.Sharma. Plasmodium Falciparum Cytoplasmic Phenylalanyl-Trna Synthetase in Complex with BRD7929 To Be Published.