Magnesium in PDB 7dwq: Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina

All present enzymatic activity of Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina:
1.97.1.12;

The structure of Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina also contains other interesting chemical elements:

Iron

(Fe)

12 atoms

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 50; Page 6, Binding sites: 51 - 60; Page 7, Binding sites: 61 - 70; Page 8, Binding sites: 71 - 77;

Binding sites:

The binding sites of Magnesium atom in the Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina (pdb code 7dwq). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 77 binding sites of Magnesium where determined in the Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina, PDB code: 7dwq:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 77 in the Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1022 b:67.8 occ:1.00 MG A:CL71022 0.0 67.8 1.0 ND A:CL71022 2.0 67.8 1.0 NB A:CL71022 2.0 67.8 1.0 NA A:CL71022 2.0 67.8 1.0 NC A:CL71022 2.1 67.8 1.0 C4D A:CL71022 3.0 67.8 1.0 C4A A:CL71022 3.0 67.8 1.0 C1B A:CL71022 3.0 67.8 1.0 C4B A:CL71022 3.1 67.8 1.0 C1A A:CL71022 3.1 67.8 1.0 C1C A:CL71022 3.1 67.8 1.0 C1D A:CL71022 3.1 67.8 1.0 C4C A:CL71022 3.1 67.8 1.0 CHB A:CL71022 3.4 67.8 1.0 CHA A:CL71022 3.4 67.8 1.0 CHC A:CL71022 3.5 67.8 1.0 CHD A:CL71022 3.6 67.8 1.0 CBB B:PHO1023 3.6 68.2 1.0 CAB B:PHO1023 4.0 68.2 1.0 C3D A:CL71022 4.2 67.8 1.0 C3B A:CL71022 4.3 67.8 1.0 C2B A:CL71022 4.3 67.8 1.0 C3A A:CL71022 4.3 67.8 1.0 C2D A:CL71022 4.3 67.8 1.0 C2C A:CL71022 4.4 67.8 1.0 C3C A:CL71022 4.4 67.8 1.0 C2A A:CL71022 4.4 67.8 1.0 CB B:ALA661 4.6 65.5 1.0 C3B B:PHO1023 4.8 68.2 1.0 CBD A:CL71022 4.9 67.8 1.0 ND2 A:ASN602 4.9 72.2 1.0 C4 A:G9R1011 5.0 76.7 1.0 C20 A:G9R1011 5.0 76.7 1.0

Magnesium binding site 2 out of 77 in the Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1101 b:115.7 occ:1.00 MG A:CL71101 0.0 115.7 1.0 ND A:CL71101 2.0 115.7 1.0 NB A:CL71101 2.0 115.7 1.0 NA A:CL71101 2.1 115.7 1.0 NC A:CL71101 2.1 115.7 1.0 C4D A:CL71101 3.0 115.7 1.0 C4A A:CL71101 3.0 115.7 1.0 C1B A:CL71101 3.1 115.7 1.0 C4B A:CL71101 3.1 115.7 1.0 C1A A:CL71101 3.1 115.7 1.0 C1C A:CL71101 3.1 115.7 1.0 C1D A:CL71101 3.2 115.7 1.0 C4C A:CL71101 3.2 115.7 1.0 CE1 A:HIS53 3.2 112.2 1.0 NE2 A:HIS53 3.3 112.2 1.0 CHB A:CL71101 3.4 115.7 1.0 CHA A:CL71101 3.4 115.7 1.0 CHC A:CL71101 3.5 115.7 1.0 CHD A:CL71101 3.6 115.7 1.0 CB J:ALA21 3.6 126.2 1.0 C3D A:CL71101 4.2 115.7 1.0 C3B A:CL71101 4.3 115.7 1.0 C2B A:CL71101 4.3 115.7 1.0 C2D A:CL71101 4.3 115.7 1.0 C3A A:CL71101 4.4 115.7 1.0 C2C A:CL71101 4.4 115.7 1.0 C3C A:CL71101 4.4 115.7 1.0 ND1 A:HIS53 4.4 112.2 1.0 C2A A:CL71101 4.4 115.7 1.0 CD2 A:HIS53 4.5 112.2 1.0 CBD A:CL71101 4.9 115.7 1.0

Magnesium binding site 3 out of 77 in the Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1102 b:104.7 occ:1.00 MG A:CL71102 0.0 104.7 1.0 NE2 A:HIS57 1.9 103.7 1.0 ND A:CL71102 2.0 104.7 1.0 NB A:CL71102 2.0 104.7 1.0 NA A:CL71102 2.1 104.7 1.0 NC A:CL71102 2.1 104.7 1.0 CE1 A:HIS57 2.4 103.7 1.0 C4D A:CL71102 3.0 104.7 1.0 C4A A:CL71102 3.0 104.7 1.0 C1B A:CL71102 3.1 104.7 1.0 C1A A:CL71102 3.1 104.7 1.0 C4B A:CL71102 3.1 104.7 1.0 C1C A:CL71102 3.1 104.7 1.0 C4C A:CL71102 3.2 104.7 1.0 C1D A:CL71102 3.2 104.7 1.0 CD2 A:HIS57 3.2 103.7 1.0 CHB A:CL71102 3.4 104.7 1.0 CHA A:CL71102 3.4 104.7 1.0 CHC A:CL71102 3.5 104.7 1.0 CHD A:CL71102 3.6 104.7 1.0 ND1 A:HIS57 3.6 103.7 1.0 CG A:HIS57 4.1 103.7 1.0 C3D A:CL71102 4.2 104.7 1.0 C3B A:CL71102 4.3 104.7 1.0 C2B A:CL71102 4.3 104.7 1.0 C3A A:CL71102 4.3 104.7 1.0 C2D A:CL71102 4.3 104.7 1.0 C2C A:CL71102 4.4 104.7 1.0 C3C A:CL71102 4.4 104.7 1.0 C2A A:CL71102 4.4 104.7 1.0 CBD A:CL71102 4.9 104.7 1.0

Magnesium binding site 4 out of 77 in the Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1103 b:90.0 occ:1.00 MG A:CL71103 0.0 90.0 1.0 ND A:CL71103 2.0 90.0 1.0 NB A:CL71103 2.0 90.0 1.0 NA A:CL71103 2.1 90.0 1.0 NC A:CL71103 2.1 90.0 1.0 CMB A:CL71128 2.1 89.2 1.0 C4D A:CL71103 3.0 90.0 1.0 C4A A:CL71103 3.0 90.0 1.0 C1B A:CL71103 3.1 90.0 1.0 C4B A:CL71103 3.1 90.0 1.0 C1A A:CL71103 3.1 90.0 1.0 C1C A:CL71103 3.1 90.0 1.0 C4C A:CL71103 3.2 90.0 1.0 C1D A:CL71103 3.2 90.0 1.0 NE2 A:HIS77 3.4 104.5 1.0 CHB A:CL71103 3.4 90.0 1.0 CHA A:CL71103 3.4 90.0 1.0 CHC A:CL71103 3.5 90.0 1.0 CHD A:CL71103 3.6 90.0 1.0 C2B A:CL71128 3.6 89.2 1.0 CD2 A:HIS77 3.7 104.5 1.0 C3D A:CL71103 4.2 90.0 1.0 C3B A:CL71103 4.3 90.0 1.0 C2B A:CL71103 4.3 90.0 1.0 C2D A:CL71103 4.3 90.0 1.0 C3A A:CL71103 4.3 90.0 1.0 C2C A:CL71103 4.4 90.0 1.0 C3C A:CL71103 4.4 90.0 1.0 C2A A:CL71103 4.4 90.0 1.0 CAB A:CL71128 4.5 89.2 1.0 C3B A:CL71128 4.5 89.2 1.0 CE1 A:HIS77 4.6 104.5 1.0 C1B A:CL71128 4.7 89.2 1.0 CG2 A:ILE73 4.9 107.5 1.0 CBD A:CL71103 4.9 90.0 1.0

Magnesium binding site 5 out of 77 in the Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1104 b:77.8 occ:1.00 MG A:CL71104 0.0 77.8 1.0 ND A:CL71104 2.0 77.8 1.0 NB A:CL71104 2.0 77.8 1.0 NA A:CL71104 2.1 77.8 1.0 NC A:CL71104 2.1 77.8 1.0 C4D A:CL71104 3.0 77.8 1.0 C4A A:CL71104 3.0 77.8 1.0 C1B A:CL71104 3.1 77.8 1.0 C4B A:CL71104 3.1 77.8 1.0 C1A A:CL71104 3.1 77.8 1.0 C1C A:CL71104 3.1 77.8 1.0 C1D A:CL71104 3.2 77.8 1.0 C4C A:CL71104 3.2 77.8 1.0 CE1 A:HIS80 3.2 95.1 1.0 CHB A:CL71104 3.4 77.8 1.0 CHA A:CL71104 3.4 77.8 1.0 CHC A:CL71104 3.5 77.8 1.0 CHD A:CL71104 3.6 77.8 1.0 ND1 A:HIS80 3.9 95.1 1.0 C17 A:CL71104 4.0 77.8 1.0 C15 A:CL71104 4.2 77.8 1.0 C3D A:CL71104 4.2 77.8 1.0 NE2 A:HIS80 4.2 95.1 1.0 C3B A:CL71104 4.3 77.8 1.0 C2B A:CL71104 4.3 77.8 1.0 C3A A:CL71104 4.3 77.8 1.0 C2D A:CL71104 4.3 77.8 1.0 C2C A:CL71104 4.4 77.8 1.0 C3C A:CL71104 4.4 77.8 1.0 C2A A:CL71104 4.4 77.8 1.0 C16 A:CL71104 4.7 77.8 1.0 CBD A:CL71104 4.9 77.8 1.0 CMA A:CL71103 5.0 90.0 1.0 C13 A:CL71104 5.0 77.8 1.0

Magnesium binding site 6 out of 77 in the Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1105 b:103.1 occ:1.00 MG A:CL71105 0.0 103.1 1.0 NE2 A:HIS94 1.9 99.2 1.0 ND A:CL71105 2.0 103.1 1.0 NB A:CL71105 2.0 103.1 1.0 NA A:CL71105 2.1 103.1 1.0 NC A:CL71105 2.1 103.1 1.0 CE1 A:HIS94 2.5 99.2 1.0 C4D A:CL71105 3.0 103.1 1.0 C4A A:CL71105 3.0 103.1 1.0 C1B A:CL71105 3.1 103.1 1.0 C4B A:CL71105 3.1 103.1 1.0 C1A A:CL71105 3.1 103.1 1.0 C1C A:CL71105 3.1 103.1 1.0 CD2 A:HIS94 3.2 99.2 1.0 C4C A:CL71105 3.2 103.1 1.0 C1D A:CL71105 3.2 103.1 1.0 CHB A:CL71105 3.4 103.1 1.0 CHA A:CL71105 3.4 103.1 1.0 CHC A:CL71105 3.5 103.1 1.0 CHD A:CL71105 3.6 103.1 1.0 ND1 A:HIS94 3.8 99.2 1.0 CG A:HIS94 4.1 99.2 1.0 C3D A:CL71105 4.2 103.1 1.0 C3B A:CL71105 4.3 103.1 1.0 C2B A:CL71105 4.3 103.1 1.0 C3A A:CL71105 4.3 103.1 1.0 C2D A:CL71105 4.4 103.1 1.0 C2C A:CL71105 4.4 103.1 1.0 C3C A:CL71105 4.4 103.1 1.0 C2A A:CL71105 4.4 103.1 1.0 CBD A:CL71105 4.9 103.1 1.0 CBA A:CL71105 5.0 103.1 1.0

Magnesium binding site 7 out of 77 in the Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1106 b:96.6 occ:1.00 MG A:CL71106 0.0 96.6 1.0 NE2 A:HIS116 1.9 102.4 1.0 ND A:CL71106 2.0 96.6 1.0 NB A:CL71106 2.0 96.6 1.0 NA A:CL71106 2.1 96.6 1.0 NC A:CL71106 2.1 96.6 1.0 CE1 A:HIS116 2.2 102.4 1.0 C4D A:CL71106 3.0 96.6 1.0 C4A A:CL71106 3.0 96.6 1.0 C1B A:CL71106 3.1 96.6 1.0 C1A A:CL71106 3.1 96.6 1.0 C4B A:CL71106 3.1 96.6 1.0 C1C A:CL71106 3.1 96.6 1.0 CD2 A:HIS116 3.1 102.4 1.0 C1D A:CL71106 3.2 96.6 1.0 C4C A:CL71106 3.2 96.6 1.0 ND1 A:HIS116 3.4 102.4 1.0 CHB A:CL71106 3.4 96.6 1.0 CHA A:CL71106 3.4 96.6 1.0 CHC A:CL71106 3.5 96.6 1.0 CHD A:CL71106 3.6 96.6 1.0 CG A:HIS116 3.8 102.4 1.0 C5 A:CL71126 3.9 90.0 1.0 C6 A:CL71126 4.0 90.0 1.0 C3D A:CL71106 4.2 96.6 1.0 C3B A:CL71106 4.3 96.6 1.0 C2B A:CL71106 4.3 96.6 1.0 C2D A:CL71106 4.3 96.6 1.0 C3A A:CL71106 4.3 96.6 1.0 C2C A:CL71106 4.4 96.6 1.0 C3C A:CL71106 4.4 96.6 1.0 C2A A:CL71106 4.4 96.6 1.0 O1A A:CL71106 4.5 96.6 1.0 C3 A:CL71126 4.9 90.0 1.0 CBD A:CL71106 4.9 96.6 1.0

Magnesium binding site 8 out of 77 in the Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1107 b:105.6 occ:1.00 MG A:CL71107 0.0 105.6 1.0 ND A:CL71107 2.0 105.6 1.0 NB A:CL71107 2.0 105.6 1.0 NA A:CL71107 2.1 105.6 1.0 NC A:CL71107 2.1 105.6 1.0 OE1 A:GLN124 2.1 108.1 1.0 C4D A:CL71107 3.0 105.6 1.0 C4A A:CL71107 3.0 105.6 1.0 C1B A:CL71107 3.1 105.6 1.0 C4B A:CL71107 3.1 105.6 1.0 C1A A:CL71107 3.1 105.6 1.0 C1C A:CL71107 3.1 105.6 1.0 C4C A:CL71107 3.2 105.6 1.0 C1D A:CL71107 3.2 105.6 1.0 CD A:GLN124 3.3 108.1 1.0 CHB A:CL71107 3.4 105.6 1.0 CHA A:CL71107 3.4 105.6 1.0 CHC A:CL71107 3.5 105.6 1.0 CHD A:CL71107 3.6 105.6 1.0 C17 A:CL71126 3.7 90.0 1.0 NE2 A:GLN124 3.9 108.1 1.0 C3D A:CL71107 4.2 105.6 1.0 C3B A:CL71107 4.3 105.6 1.0 C2B A:CL71107 4.3 105.6 1.0 C3A A:CL71107 4.3 105.6 1.0 C2D A:CL71107 4.3 105.6 1.0 C2C A:CL71107 4.4 105.6 1.0 C3C A:CL71107 4.4 105.6 1.0 C2A A:CL71107 4.4 105.6 1.0 C15 A:CL71126 4.5 90.0 1.0 CG A:GLN124 4.5 108.1 1.0 CB A:GLN124 4.5 108.1 1.0 C16 A:CL71126 4.6 90.0 1.0 C18 A:CL71126 4.7 90.0 1.0 CBD A:CL71107 4.9 105.6 1.0

Magnesium binding site 9 out of 77 in the Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1109 b:115.3 occ:1.00 MG A:CL71109 0.0 115.3 1.0 ND A:CL71109 2.0 115.3 1.0 NB A:CL71109 2.0 115.3 1.0 NA A:CL71109 2.1 115.3 1.0 NC A:CL71109 2.1 115.3 1.0 O1A A:CL71102 2.1 104.7 1.0 C4D A:CL71109 3.0 115.3 1.0 C4A A:CL71109 3.0 115.3 1.0 C1B A:CL71109 3.1 115.3 1.0 C4B A:CL71109 3.1 115.3 1.0 C1A A:CL71109 3.1 115.3 1.0 C1C A:CL71109 3.1 115.3 1.0 C4C A:CL71109 3.2 115.3 1.0 C1D A:CL71109 3.2 115.3 1.0 NE2 A:HIS182 3.2 118.7 1.0 CGA A:CL71102 3.2 104.7 1.0 CHB A:CL71109 3.4 115.3 1.0 CHA A:CL71109 3.4 115.3 1.0 CHC A:CL71109 3.5 115.3 1.0 CHD A:CL71109 3.6 115.3 1.0 CE1 A:HIS182 3.7 118.7 1.0 O2A A:CL71102 3.7 104.7 1.0 C3D A:CL71109 4.2 115.3 1.0 C3B A:CL71109 4.3 115.3 1.0 C2B A:CL71109 4.3 115.3 1.0 C2D A:CL71109 4.3 115.3 1.0 C3A A:CL71109 4.3 115.3 1.0 C2C A:CL71109 4.4 115.3 1.0 C3C A:CL71109 4.4 115.3 1.0 CD2 A:HIS182 4.4 118.7 1.0 C2A A:CL71109 4.4 115.3 1.0 CBA A:CL71102 4.5 104.7 1.0 O1A A:CL71109 4.6 115.3 1.0 CAA A:CL71102 4.8 104.7 1.0 CBD A:CL71109 4.9 115.3 1.0 ND1 A:HIS182 4.9 118.7 1.0

Magnesium binding site 10 out of 77 in the Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Photosystem I From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1110 b:118.5 occ:1.00 MG A:CL71110 0.0 118.5 1.0 NE2 A:HIS200 1.9 118.2 1.0 ND A:CL71110 2.0 118.5 1.0 NB A:CL71110 2.0 118.5 1.0 NA A:CL71110 2.1 118.5 1.0 NC A:CL71110 2.1 118.5 1.0 CE1 A:HIS200 2.8 118.2 1.0 CD2 A:HIS200 2.9 118.2 1.0 C4D A:CL71110 3.0 118.5 1.0 C4A A:CL71110 3.0 118.5 1.0 C1B A:CL71110 3.1 118.5 1.0 C4B A:CL71110 3.1 118.5 1.0 C1A A:CL71110 3.1 118.5 1.0 C1C A:CL71110 3.1 118.5 1.0 C1D A:CL71110 3.2 118.5 1.0 C4C A:CL71110 3.2 118.5 1.0 CHB A:CL71110 3.4 118.5 1.0 CHA A:CL71110 3.5 118.5 1.0 CHC A:CL71110 3.5 118.5 1.0 CHD A:CL71110 3.6 118.5 1.0 ND1 A:HIS200 4.0 118.2 1.0 CG A:HIS200 4.0 118.2 1.0 C3D A:CL71110 4.2 118.5 1.0 C3B A:CL71110 4.3 118.5 1.0 C2B A:CL71110 4.3 118.5 1.0 C2D A:CL71110 4.3 118.5 1.0 C3A A:CL71110 4.3 118.5 1.0 C2C A:CL71110 4.4 118.5 1.0 C3C A:CL71110 4.4 118.5 1.0 C2A A:CL71110 4.4 118.5 1.0 CBD A:CL71110 4.9 118.5 1.0 O2A A:CL71110 5.0 118.5 1.0

C.Xu, Q.Zhu, J.H.Chen, L.Shen, X.Yi, Z.Huang, W.Wang, M.Chen, T.Kuang, J.R.Shen, X.Zhang, G.Han. A Unique Photosystem I Reaction Center From A Chlorophyll D-Containing Cyanobacterium Acaryochloris Marina. J Integr Plant Biol 2021.
ISSN: ISSN 1744-7909
PubMed: 34002536
DOI: 10.1111/JIPB.13113