Magnesium in PDB 7e0h: Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii
Magnesium Binding Sites:
Magnesium binding site 1 out
of 42 in 7e0h
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Magnesium Binding Sites List in 7e0h
Magnesium binding site 1 out
of 42 in the Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
X:Mg601
b:76.8
occ:1.00
|
MG
|
X:CHL601
|
0.0
|
76.8
|
1.0
|
NA
|
X:CHL601
|
2.0
|
76.8
|
1.0
|
ND
|
X:CHL601
|
2.0
|
76.8
|
1.0
|
NB
|
X:CHL601
|
2.0
|
76.8
|
1.0
|
NC
|
X:CHL601
|
2.1
|
76.8
|
1.0
|
O
|
X:PHE40
|
2.2
|
72.7
|
1.0
|
C4A
|
X:CHL601
|
2.9
|
76.8
|
1.0
|
C4D
|
X:CHL601
|
3.0
|
76.8
|
1.0
|
C1A
|
X:CHL601
|
3.0
|
76.8
|
1.0
|
C1B
|
X:CHL601
|
3.0
|
76.8
|
1.0
|
C4B
|
X:CHL601
|
3.1
|
76.8
|
1.0
|
C1C
|
X:CHL601
|
3.1
|
76.8
|
1.0
|
C4C
|
X:CHL601
|
3.1
|
76.8
|
1.0
|
C1D
|
X:CHL601
|
3.2
|
76.8
|
1.0
|
C
|
X:PHE40
|
3.2
|
72.7
|
1.0
|
CHB
|
X:CHL601
|
3.3
|
76.8
|
1.0
|
CHC
|
X:CHL601
|
3.4
|
76.8
|
1.0
|
CHA
|
X:CHL601
|
3.5
|
76.8
|
1.0
|
CHD
|
X:CHL601
|
3.6
|
76.8
|
1.0
|
CA
|
X:PHE40
|
4.0
|
72.7
|
1.0
|
C39
|
Z:XAT1622
|
4.0
|
83.7
|
1.0
|
N
|
X:LEU41
|
4.2
|
69.3
|
1.0
|
C3D
|
X:CHL601
|
4.2
|
76.8
|
1.0
|
C3A
|
X:CHL601
|
4.3
|
76.8
|
1.0
|
C9
|
X:LHG2630
|
4.3
|
89.0
|
1.0
|
C2A
|
X:CHL601
|
4.3
|
76.8
|
1.0
|
CA
|
X:LEU41
|
4.4
|
69.3
|
1.0
|
C3B
|
X:CHL601
|
4.4
|
76.8
|
1.0
|
C2B
|
X:CHL601
|
4.4
|
76.8
|
1.0
|
C2C
|
X:CHL601
|
4.4
|
76.8
|
1.0
|
C2D
|
X:CHL601
|
4.4
|
76.8
|
1.0
|
C3C
|
X:CHL601
|
4.4
|
76.8
|
1.0
|
C8
|
X:LHG2630
|
4.6
|
89.0
|
1.0
|
CB
|
X:PHE40
|
4.7
|
72.7
|
1.0
|
O
|
X:LYS39
|
4.9
|
67.3
|
1.0
|
C
|
X:LEU41
|
4.9
|
69.3
|
1.0
|
CBD
|
X:CHL601
|
5.0
|
76.8
|
1.0
|
|
Magnesium binding site 2 out
of 42 in 7e0h
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Magnesium Binding Sites List in 7e0h
Magnesium binding site 2 out
of 42 in the Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
X:Mg602
b:77.2
occ:1.00
|
MG
|
X:CLA602
|
0.0
|
77.2
|
1.0
|
NB
|
X:CLA602
|
2.0
|
77.2
|
1.0
|
ND
|
X:CLA602
|
2.0
|
77.2
|
1.0
|
NC
|
X:CLA602
|
2.1
|
77.2
|
1.0
|
NA
|
X:CLA602
|
2.1
|
77.2
|
1.0
|
OE2
|
X:GLU82
|
2.2
|
76.3
|
1.0
|
C4D
|
X:CLA602
|
2.9
|
77.2
|
1.0
|
C1B
|
X:CLA602
|
3.0
|
77.2
|
1.0
|
C4A
|
X:CLA602
|
3.1
|
77.2
|
1.0
|
C4B
|
X:CLA602
|
3.1
|
77.2
|
1.0
|
C1C
|
X:CLA602
|
3.1
|
77.2
|
1.0
|
CD
|
X:GLU82
|
3.1
|
76.3
|
1.0
|
C1A
|
X:CLA602
|
3.2
|
77.2
|
1.0
|
C4C
|
X:CLA602
|
3.2
|
77.2
|
1.0
|
C1D
|
X:CLA602
|
3.2
|
77.2
|
1.0
|
CHB
|
X:CLA602
|
3.4
|
77.2
|
1.0
|
CHC
|
X:CLA602
|
3.4
|
77.2
|
1.0
|
CHA
|
X:CLA602
|
3.5
|
77.2
|
1.0
|
CHD
|
X:CLA602
|
3.6
|
77.2
|
1.0
|
C38
|
X:LUT1621
|
3.6
|
82.8
|
1.0
|
CG
|
X:GLU82
|
3.7
|
76.3
|
1.0
|
OE1
|
X:GLU82
|
4.0
|
76.3
|
1.0
|
NE
|
X:ARG202
|
4.2
|
73.4
|
1.0
|
C3D
|
X:CLA602
|
4.2
|
77.2
|
1.0
|
C2B
|
X:CLA602
|
4.3
|
77.2
|
1.0
|
C3B
|
X:CLA602
|
4.3
|
77.2
|
1.0
|
C2C
|
X:CLA602
|
4.3
|
77.2
|
1.0
|
C2D
|
X:CLA602
|
4.4
|
77.2
|
1.0
|
C3C
|
X:CLA602
|
4.4
|
77.2
|
1.0
|
C3A
|
X:CLA602
|
4.4
|
77.2
|
1.0
|
C2A
|
X:CLA602
|
4.5
|
77.2
|
1.0
|
NH2
|
X:ARG202
|
4.6
|
73.4
|
1.0
|
CB
|
X:GLU82
|
4.7
|
76.3
|
1.0
|
CZ
|
X:ARG202
|
4.7
|
73.4
|
1.0
|
CG
|
X:ARG202
|
4.9
|
73.4
|
1.0
|
CBD
|
X:CLA602
|
4.9
|
77.2
|
1.0
|
O2A
|
X:CLA602
|
4.9
|
77.2
|
1.0
|
C25
|
X:LUT1621
|
4.9
|
82.8
|
1.0
|
CD
|
X:ARG202
|
5.0
|
73.4
|
1.0
|
|
Magnesium binding site 3 out
of 42 in 7e0h
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Magnesium Binding Sites List in 7e0h
Magnesium binding site 3 out
of 42 in the Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
X:Mg603
b:92.9
occ:1.00
|
MG
|
X:CLA603
|
0.0
|
92.9
|
1.0
|
NB
|
X:CLA603
|
2.0
|
92.9
|
1.0
|
ND
|
X:CLA603
|
2.0
|
92.9
|
1.0
|
NC
|
X:CLA603
|
2.1
|
92.9
|
1.0
|
NA
|
X:CLA603
|
2.1
|
92.9
|
1.0
|
NE2
|
X:HIS85
|
2.2
|
83.5
|
1.0
|
CE1
|
X:HIS85
|
2.8
|
83.5
|
1.0
|
C4D
|
X:CLA603
|
2.9
|
92.9
|
1.0
|
C1B
|
X:CLA603
|
3.0
|
92.9
|
1.0
|
C4A
|
X:CLA603
|
3.0
|
92.9
|
1.0
|
C4B
|
X:CLA603
|
3.1
|
92.9
|
1.0
|
C1C
|
X:CLA603
|
3.1
|
92.9
|
1.0
|
C4C
|
X:CLA603
|
3.2
|
92.9
|
1.0
|
C1D
|
X:CLA603
|
3.2
|
92.9
|
1.0
|
C1A
|
X:CLA603
|
3.2
|
92.9
|
1.0
|
CHB
|
X:CLA603
|
3.4
|
92.9
|
1.0
|
CD2
|
X:HIS85
|
3.4
|
83.5
|
1.0
|
CHC
|
X:CLA603
|
3.5
|
92.9
|
1.0
|
CHA
|
X:CLA603
|
3.5
|
92.9
|
1.0
|
CHD
|
X:CLA603
|
3.6
|
92.9
|
1.0
|
C8
|
X:CHL609
|
3.9
|
96.5
|
1.0
|
ND1
|
X:HIS85
|
4.1
|
83.5
|
1.0
|
C10
|
X:CHL609
|
4.2
|
96.5
|
1.0
|
C3D
|
X:CLA603
|
4.3
|
92.9
|
1.0
|
C2B
|
X:CLA603
|
4.3
|
92.9
|
1.0
|
C3B
|
X:CLA603
|
4.3
|
92.9
|
1.0
|
C2C
|
X:CLA603
|
4.4
|
92.9
|
1.0
|
CG
|
X:HIS85
|
4.4
|
83.5
|
1.0
|
C2D
|
X:CLA603
|
4.4
|
92.9
|
1.0
|
C11
|
X:CHL609
|
4.4
|
96.5
|
1.0
|
C3C
|
X:CLA603
|
4.4
|
92.9
|
1.0
|
C3A
|
X:CLA603
|
4.4
|
92.9
|
1.0
|
C2A
|
X:CLA603
|
4.5
|
92.9
|
1.0
|
C7
|
X:CHL609
|
4.7
|
96.5
|
1.0
|
C9
|
X:CHL609
|
4.9
|
96.5
|
1.0
|
CBD
|
X:CLA603
|
4.9
|
92.9
|
1.0
|
|
Magnesium binding site 4 out
of 42 in 7e0h
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Magnesium Binding Sites List in 7e0h
Magnesium binding site 4 out
of 42 in the Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
X:Mg604
b:106.7
occ:1.00
|
MG
|
X:CLA604
|
0.0
|
106.7
|
1.0
|
NB
|
X:CLA604
|
2.0
|
106.7
|
1.0
|
ND
|
X:CLA604
|
2.0
|
106.7
|
1.0
|
NC
|
X:CLA604
|
2.1
|
106.7
|
1.0
|
NA
|
X:CLA604
|
2.1
|
106.7
|
1.0
|
C4D
|
X:CLA604
|
2.9
|
106.7
|
1.0
|
C1B
|
X:CLA604
|
3.0
|
106.7
|
1.0
|
C4B
|
X:CLA604
|
3.1
|
106.7
|
1.0
|
C4A
|
X:CLA604
|
3.1
|
106.7
|
1.0
|
C1C
|
X:CLA604
|
3.1
|
106.7
|
1.0
|
C4C
|
X:CLA604
|
3.2
|
106.7
|
1.0
|
C1A
|
X:CLA604
|
3.2
|
106.7
|
1.0
|
C1D
|
X:CLA604
|
3.2
|
106.7
|
1.0
|
CHB
|
X:CLA604
|
3.4
|
106.7
|
1.0
|
O23
|
X:NEX1623
|
3.4
|
124.8
|
1.0
|
CHC
|
X:CLA604
|
3.4
|
106.7
|
1.0
|
CHA
|
X:CLA604
|
3.5
|
106.7
|
1.0
|
CHD
|
X:CLA604
|
3.6
|
106.7
|
1.0
|
C24
|
X:NEX1623
|
3.8
|
124.8
|
1.0
|
O
|
X:GLY95
|
3.9
|
77.2
|
1.0
|
CA
|
X:GLY95
|
4.0
|
77.2
|
1.0
|
C23
|
X:NEX1623
|
4.0
|
124.8
|
1.0
|
C22
|
X:NEX1623
|
4.1
|
124.8
|
1.0
|
C3D
|
X:CLA604
|
4.2
|
106.7
|
1.0
|
C2B
|
X:CLA604
|
4.3
|
106.7
|
1.0
|
C3B
|
X:CLA604
|
4.3
|
106.7
|
1.0
|
C2C
|
X:CLA604
|
4.4
|
106.7
|
1.0
|
C2D
|
X:CLA604
|
4.4
|
106.7
|
1.0
|
C3C
|
X:CLA604
|
4.4
|
106.7
|
1.0
|
C3A
|
X:CLA604
|
4.4
|
106.7
|
1.0
|
C
|
X:GLY95
|
4.4
|
77.2
|
1.0
|
C2A
|
X:CLA604
|
4.5
|
106.7
|
1.0
|
OG1
|
X:THR98
|
4.6
|
73.4
|
1.0
|
CBD
|
X:CLA604
|
4.9
|
106.7
|
1.0
|
|
Magnesium binding site 5 out
of 42 in 7e0h
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Magnesium Binding Sites List in 7e0h
Magnesium binding site 5 out
of 42 in the Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
X:Mg605
b:131.6
occ:1.00
|
MG
|
X:CHL605
|
0.0
|
131.6
|
1.0
|
NA
|
X:CHL605
|
2.0
|
131.6
|
1.0
|
ND
|
X:CHL605
|
2.0
|
131.6
|
1.0
|
NB
|
X:CHL605
|
2.0
|
131.6
|
1.0
|
NC
|
X:CHL605
|
2.1
|
131.6
|
1.0
|
C4A
|
X:CHL605
|
2.9
|
131.6
|
1.0
|
C1A
|
X:CHL605
|
3.0
|
131.6
|
1.0
|
C4D
|
X:CHL605
|
3.0
|
131.6
|
1.0
|
C1B
|
X:CHL605
|
3.0
|
131.6
|
1.0
|
C1C
|
X:CHL605
|
3.0
|
131.6
|
1.0
|
C4B
|
X:CHL605
|
3.0
|
131.6
|
1.0
|
O
|
X:ILE136
|
3.1
|
103.6
|
1.0
|
C4C
|
X:CHL605
|
3.1
|
131.6
|
1.0
|
C1D
|
X:CHL605
|
3.2
|
131.6
|
1.0
|
CHB
|
X:CHL605
|
3.3
|
131.6
|
1.0
|
CHC
|
X:CHL605
|
3.4
|
131.6
|
1.0
|
CHA
|
X:CHL605
|
3.4
|
131.6
|
1.0
|
CHD
|
X:CHL605
|
3.5
|
131.6
|
1.0
|
C
|
X:ILE136
|
4.2
|
103.6
|
1.0
|
C3D
|
X:CHL605
|
4.2
|
131.6
|
1.0
|
C3A
|
X:CHL605
|
4.2
|
131.6
|
1.0
|
C2A
|
X:CHL605
|
4.2
|
131.6
|
1.0
|
C3B
|
X:CHL605
|
4.3
|
131.6
|
1.0
|
C2C
|
X:CHL605
|
4.4
|
131.6
|
1.0
|
C2B
|
X:CHL605
|
4.4
|
131.6
|
1.0
|
O1A
|
X:CHL605
|
4.4
|
131.6
|
1.0
|
C3C
|
X:CHL605
|
4.4
|
131.6
|
1.0
|
C2D
|
X:CHL605
|
4.4
|
131.6
|
1.0
|
CBA
|
X:CHL605
|
4.4
|
131.6
|
1.0
|
CA
|
X:ILE136
|
4.7
|
103.6
|
1.0
|
CGA
|
X:CHL605
|
4.7
|
131.6
|
1.0
|
CG2
|
X:ILE136
|
4.9
|
103.6
|
1.0
|
CBD
|
X:CHL605
|
4.9
|
131.6
|
1.0
|
CAA
|
X:CHL605
|
5.0
|
131.6
|
1.0
|
|
Magnesium binding site 6 out
of 42 in 7e0h
Go back to
Magnesium Binding Sites List in 7e0h
Magnesium binding site 6 out
of 42 in the Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
X:Mg606
b:111.5
occ:1.00
|
MG
|
X:CHL606
|
0.0
|
111.5
|
1.0
|
NA
|
X:CHL606
|
2.0
|
111.5
|
1.0
|
ND
|
X:CHL606
|
2.0
|
111.5
|
1.0
|
NB
|
X:CHL606
|
2.0
|
111.5
|
1.0
|
NC
|
X:CHL606
|
2.1
|
111.5
|
1.0
|
C4A
|
X:CHL606
|
3.0
|
111.5
|
1.0
|
C1A
|
X:CHL606
|
3.0
|
111.5
|
1.0
|
C4D
|
X:CHL606
|
3.0
|
111.5
|
1.0
|
C1B
|
X:CHL606
|
3.0
|
111.5
|
1.0
|
C1C
|
X:CHL606
|
3.0
|
111.5
|
1.0
|
C4B
|
X:CHL606
|
3.1
|
111.5
|
1.0
|
C4C
|
X:CHL606
|
3.1
|
111.5
|
1.0
|
C1D
|
X:CHL606
|
3.2
|
111.5
|
1.0
|
CHB
|
X:CHL606
|
3.3
|
111.5
|
1.0
|
CHC
|
X:CHL606
|
3.4
|
111.5
|
1.0
|
CHA
|
X:CHL606
|
3.5
|
111.5
|
1.0
|
CHD
|
X:CHL606
|
3.5
|
111.5
|
1.0
|
OE1
|
X:GLN148
|
3.9
|
91.4
|
1.0
|
C3D
|
X:CHL606
|
4.2
|
111.5
|
1.0
|
C38
|
X:NEX1623
|
4.2
|
124.8
|
1.0
|
C2A
|
X:CHL606
|
4.3
|
111.5
|
1.0
|
C3A
|
X:CHL606
|
4.3
|
111.5
|
1.0
|
CBC
|
X:CHL607
|
4.3
|
94.2
|
1.0
|
C2C
|
X:CHL606
|
4.4
|
111.5
|
1.0
|
C2B
|
X:CHL606
|
4.4
|
111.5
|
1.0
|
C3B
|
X:CHL606
|
4.4
|
111.5
|
1.0
|
C2D
|
X:CHL606
|
4.4
|
111.5
|
1.0
|
C3C
|
X:CHL606
|
4.4
|
111.5
|
1.0
|
CD
|
X:GLN148
|
4.6
|
91.4
|
1.0
|
O2A
|
X:CLA604
|
4.8
|
106.7
|
1.0
|
CAA
|
X:CHL606
|
4.9
|
111.5
|
1.0
|
CBD
|
X:CHL606
|
4.9
|
111.5
|
1.0
|
|
Magnesium binding site 7 out
of 42 in 7e0h
Go back to
Magnesium Binding Sites List in 7e0h
Magnesium binding site 7 out
of 42 in the Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
X:Mg607
b:94.2
occ:1.00
|
MG
|
X:CHL607
|
0.0
|
94.2
|
1.0
|
NA
|
X:CHL607
|
2.0
|
94.2
|
1.0
|
ND
|
X:CHL607
|
2.0
|
94.2
|
1.0
|
NB
|
X:CHL607
|
2.0
|
94.2
|
1.0
|
NC
|
X:CHL607
|
2.1
|
94.2
|
1.0
|
C4A
|
X:CHL607
|
3.0
|
94.2
|
1.0
|
C4D
|
X:CHL607
|
3.0
|
94.2
|
1.0
|
C1A
|
X:CHL607
|
3.0
|
94.2
|
1.0
|
C1B
|
X:CHL607
|
3.1
|
94.2
|
1.0
|
C1C
|
X:CHL607
|
3.1
|
94.2
|
1.0
|
C4B
|
X:CHL607
|
3.1
|
94.2
|
1.0
|
C4C
|
X:CHL607
|
3.1
|
94.2
|
1.0
|
C1D
|
X:CHL607
|
3.2
|
94.2
|
1.0
|
CHB
|
X:CHL607
|
3.3
|
94.2
|
1.0
|
CHC
|
X:CHL607
|
3.4
|
94.2
|
1.0
|
CHA
|
X:CHL607
|
3.5
|
94.2
|
1.0
|
CHD
|
X:CHL607
|
3.6
|
94.2
|
1.0
|
C14
|
Y:CHL601
|
3.7
|
103.1
|
1.0
|
OMC
|
X:CHL606
|
3.8
|
111.5
|
1.0
|
C3D
|
X:CHL607
|
4.2
|
94.2
|
1.0
|
C3A
|
X:CHL607
|
4.3
|
94.2
|
1.0
|
C2A
|
X:CHL607
|
4.3
|
94.2
|
1.0
|
C2C
|
X:CHL607
|
4.4
|
94.2
|
1.0
|
C3B
|
X:CHL607
|
4.4
|
94.2
|
1.0
|
C2B
|
X:CHL607
|
4.4
|
94.2
|
1.0
|
C18
|
X:XAT1622
|
4.4
|
116.9
|
1.0
|
C2D
|
X:CHL607
|
4.4
|
94.2
|
1.0
|
C3C
|
X:CHL607
|
4.5
|
94.2
|
1.0
|
CMC
|
X:CHL606
|
4.7
|
111.5
|
1.0
|
C16
|
Y:CHL601
|
4.9
|
103.1
|
1.0
|
CBD
|
X:CHL607
|
4.9
|
94.2
|
1.0
|
|
Magnesium binding site 8 out
of 42 in 7e0h
Go back to
Magnesium Binding Sites List in 7e0h
Magnesium binding site 8 out
of 42 in the Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
X:Mg608
b:95.9
occ:1.00
|
MG
|
X:CHL608
|
0.0
|
95.9
|
1.0
|
NA
|
X:CHL608
|
2.0
|
95.9
|
1.0
|
ND
|
X:CHL608
|
2.0
|
95.9
|
1.0
|
NB
|
X:CHL608
|
2.0
|
95.9
|
1.0
|
NC
|
X:CHL608
|
2.1
|
95.9
|
1.0
|
C4A
|
X:CHL608
|
2.9
|
95.9
|
1.0
|
C4D
|
X:CHL608
|
3.0
|
95.9
|
1.0
|
C1A
|
X:CHL608
|
3.0
|
95.9
|
1.0
|
C1B
|
X:CHL608
|
3.0
|
95.9
|
1.0
|
C1C
|
X:CHL608
|
3.1
|
95.9
|
1.0
|
C4B
|
X:CHL608
|
3.1
|
95.9
|
1.0
|
C4C
|
X:CHL608
|
3.1
|
95.9
|
1.0
|
C1D
|
X:CHL608
|
3.2
|
95.9
|
1.0
|
CHB
|
X:CHL608
|
3.3
|
95.9
|
1.0
|
CZ
|
X:PHE178
|
3.4
|
85.0
|
1.0
|
CHC
|
X:CHL608
|
3.4
|
95.9
|
1.0
|
CHA
|
X:CHL608
|
3.5
|
95.9
|
1.0
|
CHD
|
X:CHL608
|
3.6
|
95.9
|
1.0
|
CE1
|
X:PHE178
|
3.8
|
85.0
|
1.0
|
C3D
|
X:CHL608
|
4.2
|
95.9
|
1.0
|
C3A
|
X:CHL608
|
4.3
|
95.9
|
1.0
|
C2A
|
X:CHL608
|
4.3
|
95.9
|
1.0
|
O
|
X:ALA155
|
4.4
|
79.5
|
1.0
|
C2B
|
X:CHL608
|
4.4
|
95.9
|
1.0
|
C2C
|
X:CHL608
|
4.4
|
95.9
|
1.0
|
C3B
|
X:CHL608
|
4.4
|
95.9
|
1.0
|
C2D
|
X:CHL608
|
4.4
|
95.9
|
1.0
|
C3C
|
X:CHL608
|
4.4
|
95.9
|
1.0
|
CE2
|
X:PHE178
|
4.5
|
85.0
|
1.0
|
CB
|
X:ARG159
|
4.6
|
89.2
|
1.0
|
CMA
|
X:CHL608
|
4.9
|
95.9
|
1.0
|
CBD
|
X:CHL608
|
4.9
|
95.9
|
1.0
|
|
Magnesium binding site 9 out
of 42 in 7e0h
Go back to
Magnesium Binding Sites List in 7e0h
Magnesium binding site 9 out
of 42 in the Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
X:Mg609
b:96.5
occ:1.00
|
MG
|
X:CHL609
|
0.0
|
96.5
|
1.0
|
NA
|
X:CHL609
|
2.0
|
96.5
|
1.0
|
ND
|
X:CHL609
|
2.0
|
96.5
|
1.0
|
NB
|
X:CHL609
|
2.0
|
96.5
|
1.0
|
NC
|
X:CHL609
|
2.1
|
96.5
|
1.0
|
OE1
|
X:GLU156
|
2.3
|
88.6
|
1.0
|
CD
|
X:GLU156
|
2.9
|
88.6
|
1.0
|
C4A
|
X:CHL609
|
3.0
|
96.5
|
1.0
|
C4D
|
X:CHL609
|
3.0
|
96.5
|
1.0
|
C1A
|
X:CHL609
|
3.0
|
96.5
|
1.0
|
C1B
|
X:CHL609
|
3.1
|
96.5
|
1.0
|
C1C
|
X:CHL609
|
3.1
|
96.5
|
1.0
|
C4B
|
X:CHL609
|
3.1
|
96.5
|
1.0
|
C4C
|
X:CHL609
|
3.1
|
96.5
|
1.0
|
CG
|
X:GLU156
|
3.1
|
88.6
|
1.0
|
C1D
|
X:CHL609
|
3.2
|
96.5
|
1.0
|
CHB
|
X:CHL609
|
3.4
|
96.5
|
1.0
|
CHC
|
X:CHL609
|
3.4
|
96.5
|
1.0
|
CHA
|
X:CHL609
|
3.5
|
96.5
|
1.0
|
CHD
|
X:CHL609
|
3.5
|
96.5
|
1.0
|
OE2
|
X:GLU156
|
3.9
|
88.6
|
1.0
|
C3D
|
X:CHL609
|
4.2
|
96.5
|
1.0
|
CB
|
X:GLU156
|
4.2
|
88.6
|
1.0
|
C2A
|
X:CHL609
|
4.3
|
96.5
|
1.0
|
C3A
|
X:CHL609
|
4.3
|
96.5
|
1.0
|
NH2
|
X:ARG159
|
4.3
|
89.2
|
1.0
|
C3B
|
X:CHL609
|
4.4
|
96.5
|
1.0
|
C2B
|
X:CHL609
|
4.4
|
96.5
|
1.0
|
C2C
|
X:CHL609
|
4.4
|
96.5
|
1.0
|
C2D
|
X:CHL609
|
4.4
|
96.5
|
1.0
|
C3C
|
X:CHL609
|
4.4
|
96.5
|
1.0
|
C2
|
Y:CHL601
|
4.6
|
103.1
|
1.0
|
CBA
|
X:CHL609
|
4.7
|
96.5
|
1.0
|
CMD
|
X:CLA603
|
4.7
|
92.9
|
1.0
|
CBD
|
X:CHL609
|
4.9
|
96.5
|
1.0
|
|
Magnesium binding site 10 out
of 42 in 7e0h
Go back to
Magnesium Binding Sites List in 7e0h
Magnesium binding site 10 out
of 42 in the Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Lhcii-1 in the State Transition Supercomplex Psi-Lhci-Lhcii From the LHCBM1 Lacking Mutant of Chlamydomonas Reinhardtii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
X:Mg610
b:88.1
occ:1.00
|
MG
|
X:CLA610
|
0.0
|
88.1
|
1.0
|
NB
|
X:CLA610
|
2.0
|
88.1
|
1.0
|
ND
|
X:CLA610
|
2.0
|
88.1
|
1.0
|
NA
|
X:CLA610
|
2.1
|
88.1
|
1.0
|
NC
|
X:CLA610
|
2.1
|
88.1
|
1.0
|
OE2
|
X:GLU197
|
2.2
|
81.2
|
1.0
|
CD
|
X:GLU197
|
2.8
|
81.2
|
1.0
|
C4D
|
X:CLA610
|
2.9
|
88.1
|
1.0
|
C1B
|
X:CLA610
|
3.0
|
88.1
|
1.0
|
C4A
|
X:CLA610
|
3.1
|
88.1
|
1.0
|
C4B
|
X:CLA610
|
3.1
|
88.1
|
1.0
|
C1C
|
X:CLA610
|
3.1
|
88.1
|
1.0
|
C4C
|
X:CLA610
|
3.2
|
88.1
|
1.0
|
C1A
|
X:CLA610
|
3.2
|
88.1
|
1.0
|
C1D
|
X:CLA610
|
3.2
|
88.1
|
1.0
|
OE1
|
X:GLU197
|
3.2
|
81.2
|
1.0
|
CHB
|
X:CLA610
|
3.4
|
88.1
|
1.0
|
CHC
|
X:CLA610
|
3.5
|
88.1
|
1.0
|
CHA
|
X:CLA610
|
3.5
|
88.1
|
1.0
|
CHD
|
X:CLA610
|
3.6
|
88.1
|
1.0
|
CG
|
X:GLU197
|
3.8
|
81.2
|
1.0
|
C3D
|
X:CLA610
|
4.3
|
88.1
|
1.0
|
C2B
|
X:CLA610
|
4.3
|
88.1
|
1.0
|
C3B
|
X:CLA610
|
4.3
|
88.1
|
1.0
|
C2C
|
X:CLA610
|
4.3
|
88.1
|
1.0
|
C2D
|
X:CLA610
|
4.4
|
88.1
|
1.0
|
C3C
|
X:CLA610
|
4.4
|
88.1
|
1.0
|
C3A
|
X:CLA610
|
4.4
|
88.1
|
1.0
|
CB
|
X:GLU197
|
4.4
|
81.2
|
1.0
|
C38
|
X:LUT1620
|
4.4
|
84.8
|
1.0
|
C2A
|
X:CLA610
|
4.5
|
88.1
|
1.0
|
O2A
|
X:CLA610
|
4.9
|
88.1
|
1.0
|
CBD
|
X:CLA610
|
5.0
|
88.1
|
1.0
|
C25
|
X:LUT1620
|
5.0
|
84.8
|
1.0
|
CBA
|
X:CLA610
|
5.0
|
88.1
|
1.0
|
|
Reference:
X.W.Pan,
R.Tokutsu,
A.J.Li,
K.J.Takizawa,
C.H.Song,
K.Murata,
T.Yamasaki,
Z.F.Liu,
J.Minagawa,
M.Li.
Structural Basis of LHCBM5-Mediated State Transitions in Green Algae To Be Published.
Page generated: Wed Oct 2 17:39:12 2024
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