Atomistry » Magnesium » PDB 7dug-7e1h » 7e1g
Atomistry »
  Magnesium »
    PDB 7dug-7e1h »
      7e1g »

Magnesium in PDB 7e1g: Structure of MREB3 From Spiroplasma Eriocheiris

Protein crystallography data

The structure of Structure of MREB3 From Spiroplasma Eriocheiris, PDB code: 7e1g was solved by D.Takahashi, M.Miyata, K.Imada, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.99 / 1.75
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 50.29, 56.27, 120.531, 90, 90.56, 90
R / Rfree (%) 17.4 / 21.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of MREB3 From Spiroplasma Eriocheiris (pdb code 7e1g). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of MREB3 From Spiroplasma Eriocheiris, PDB code: 7e1g:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7e1g

Go back to Magnesium Binding Sites List in 7e1g
Magnesium binding site 1 out of 2 in the Structure of MREB3 From Spiroplasma Eriocheiris


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of MREB3 From Spiroplasma Eriocheiris within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg501

b:19.8
occ:1.00
O A:HOH730 2.0 16.7 1.0
O2B A:ANP502 2.0 13.4 1.0
O1G A:ANP502 2.1 22.8 1.0
O A:HOH674 2.1 15.1 1.0
O A:HOH803 2.2 18.3 1.0
O A:HOH805 2.3 18.1 1.0
PG A:ANP502 3.3 20.4 1.0
PB A:ANP502 3.3 15.4 1.0
N3B A:ANP502 3.8 17.2 1.0
O3G A:ANP502 3.8 20.8 1.0
O A:HOH744 3.9 21.7 1.0
O A:HOH788 4.0 22.2 1.0
O1A A:ANP502 4.0 14.4 1.0
O3A A:ANP502 4.2 18.1 1.0
OD2 A:ASP147 4.2 21.2 1.0
O A:HOH735 4.3 16.9 1.0
OD1 A:ASP169 4.3 14.9 1.0
O A:HOH715 4.3 18.7 1.0
O1B A:ANP502 4.4 17.0 1.0
OD2 A:ASP169 4.5 23.8 1.0
O2G A:ANP502 4.6 17.2 1.0
O A:HOH742 4.7 30.8 1.0
PA A:ANP502 4.7 14.9 1.0
OD1 A:ASP25 4.7 16.4 1.0
CG A:ASP169 4.8 17.7 1.0
CG2 A:VAL329 4.9 16.3 1.0
O A:HOH782 4.9 28.1 1.0
CA A:GLY27 4.9 12.9 1.0
O A:HOH822 5.0 21.4 1.0

Magnesium binding site 2 out of 2 in 7e1g

Go back to Magnesium Binding Sites List in 7e1g
Magnesium binding site 2 out of 2 in the Structure of MREB3 From Spiroplasma Eriocheiris


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of MREB3 From Spiroplasma Eriocheiris within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg501

b:23.7
occ:1.00
O2B B:ANP502 2.0 17.9 1.0
O B:HOH689 2.1 25.6 1.0
O B:HOH675 2.1 19.0 1.0
O B:HOH717 2.1 20.5 1.0
O1G B:ANP502 2.2 25.3 1.0
O B:HOH753 2.3 24.2 1.0
PB B:ANP502 3.4 19.5 1.0
PG B:ANP502 3.4 26.9 1.0
O B:HOH751 3.7 24.6 1.0
O3G B:ANP502 3.9 28.5 1.0
N3B B:ANP502 3.9 23.9 1.0
O1A B:ANP502 4.1 14.4 1.0
O B:HOH691 4.1 20.3 1.0
O B:HOH748 4.1 20.7 1.0
OD2 B:ASP147 4.2 25.4 1.0
O3A B:ANP502 4.2 19.6 1.0
OD2 B:ASP169 4.2 33.9 1.0
OD1 B:ASP169 4.2 20.3 1.0
O B:HOH673 4.4 35.3 1.0
O1B B:ANP502 4.5 20.6 1.0
OD1 B:ASP25 4.5 17.4 1.0
O B:HOH617 4.5 24.7 1.0
CG B:ASP169 4.6 23.4 1.0
CG2 B:VAL329 4.7 17.9 1.0
PA B:ANP502 4.7 18.3 1.0
O2G B:ANP502 4.7 25.4 1.0
O B:HOH747 4.9 26.9 1.0
OD2 B:ASP25 4.9 25.6 1.0
CG B:ASP147 5.0 21.6 1.0
CA B:GLY27 5.0 19.0 1.0

Reference:

D.Takahashi, I.Fujiwara, A.Narita, K.Imada, M.Miyata. Structures and Dynamics of Mreb Proteins Involved in Swimming Motility of Spiroplasma Eriocheiris To Be Published.
Page generated: Wed Oct 2 17:44:42 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy