Magnesium in PDB 7ef7: Crystal Structure of Xanthosine Monophosphate Phosphatase Complex with Xmp

The structure of Crystal Structure of Xanthosine Monophosphate Phosphatase Complex with Xmp, PDB code: 7ef7 was solved by S.Yang, S.Rhee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	25.40 / 1.50
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	37.67, 56.779, 56.958, 90, 92.92, 90
R / Rfree (%)	21.3 / 24

The binding sites of Magnesium atom in the Crystal Structure of Xanthosine Monophosphate Phosphatase Complex with Xmp (pdb code 7ef7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Xanthosine Monophosphate Phosphatase Complex with Xmp, PDB code: 7ef7:

Magnesium binding site 1 out of 1 in the Crystal Structure of Xanthosine Monophosphate Phosphatase Complex with Xmp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Xanthosine Monophosphate Phosphatase Complex with Xmp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg301 b:36.9 occ:1.00 O3P A:XMP302 2.2 41.5 1.0 O A:HOH446 2.3 45.5 1.0 O A:ASP14 2.4 41.6 1.0 O A:HOH425 2.4 44.8 1.0 OD1 A:ASP184 2.5 42.1 1.0 OD2 A:ASP184 2.6 43.5 1.0 O A:HOH470 2.6 50.1 1.0 CG A:ASP184 2.9 41.2 1.0 C A:ASP14 3.5 41.1 1.0 P A:XMP302 3.7 41.5 1.0 CB A:ASP14 4.2 41.8 1.0 CA A:ASP14 4.2 42.6 1.0 O A:HOH438 4.3 43.4 1.0 C5' A:XMP302 4.3 48.9 1.0 CB A:ASP184 4.4 43.3 1.0 N A:ASP14 4.4 40.7 1.0 CB A:ASP15 4.4 45.3 1.0 O2P A:XMP302 4.5 41.5 1.0 O5' A:XMP302 4.5 43.1 1.0 OD1 A:ASP183 4.5 45.9 1.0 O1P A:XMP302 4.6 44.1 1.0 N A:ASP15 4.6 40.3 1.0 OD2 A:ASP15 4.7 47.1 1.0 OG1 A:THR16 4.8 41.5 1.0 CA A:ASP15 4.9 42.2 1.0 N A:ASP184 5.0 41.0 1.0

S.Yang, S.Rhee. Crystal Structure of Xanthosine Monophosphate Phosphatase Complex with Xmp To Be Published.