Atomistry » Magnesium » PDB 7ev3-7f68 » 7eze
Atomistry »
  Magnesium »
    PDB 7ev3-7f68 »
      7eze »

Magnesium in PDB 7eze: Thorarchaeota Rab Gtp-Gamma-S/MG2+ (Soak)

Protein crystallography data

The structure of Thorarchaeota Rab Gtp-Gamma-S/MG2+ (Soak), PDB code: 7eze was solved by R.C.Robinson, L.T.Tran, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.96 / 1.95
Space group P 31
Cell size a, b, c (Å), α, β, γ (°) 69.133, 69.133, 66.927, 90, 90, 120
R / Rfree (%) 16.6 / 20.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Thorarchaeota Rab Gtp-Gamma-S/MG2+ (Soak) (pdb code 7eze). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Thorarchaeota Rab Gtp-Gamma-S/MG2+ (Soak), PDB code: 7eze:

Magnesium binding site 1 out of 1 in 7eze

Go back to Magnesium Binding Sites List in 7eze
Magnesium binding site 1 out of 1 in the Thorarchaeota Rab Gtp-Gamma-S/MG2+ (Soak)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Thorarchaeota Rab Gtp-Gamma-S/MG2+ (Soak) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg302

b:33.0
occ:1.00
O2B A:GSP301 2.0 25.8 1.0
O A:HOH431 2.1 29.2 1.0
OG1 A:THR20 2.2 30.9 1.0
O A:HOH421 2.2 33.3 1.0
O3G A:GSP301 2.3 43.7 1.0
O A:HOH487 2.3 36.1 1.0
PG A:GSP301 3.0 45.3 1.0
O2G A:GSP301 3.2 56.4 1.0
PB A:GSP301 3.2 28.6 1.0
CB A:THR20 3.3 24.7 1.0
O3B A:GSP301 3.4 41.1 1.0
N A:THR20 4.0 24.4 1.0
O1A A:GSP301 4.0 30.2 1.0
O1B A:GSP301 4.1 31.6 1.0
OD2 A:ASP63 4.1 42.4 1.0
O A:HOH410 4.2 56.1 1.0
CA A:THR20 4.2 22.0 1.0
O3A A:GSP301 4.3 28.1 1.0
CG2 A:THR20 4.3 25.7 1.0
OD1 A:ASP63 4.5 40.2 1.0
PA A:GSP301 4.5 26.4 1.0
O2A A:GSP301 4.6 28.1 1.0
S1G A:GSP301 4.6 66.5 1.0
CG A:ASP63 4.7 40.3 1.0

Reference:

R.C.Robinson, L.T.Tran. Structure of Thor-Rab To Be Published.
Page generated: Wed Apr 5 12:53:53 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy