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Magnesium in PDB 7f0w: Crystal Structure of Kras-G12D Bound to Gdp with Switch 1 Open Conformation

Enzymatic activity of Crystal Structure of Kras-G12D Bound to Gdp with Switch 1 Open Conformation

All present enzymatic activity of Crystal Structure of Kras-G12D Bound to Gdp with Switch 1 Open Conformation:
3.6.5.2;

Protein crystallography data

The structure of Crystal Structure of Kras-G12D Bound to Gdp with Switch 1 Open Conformation, PDB code: 7f0w was solved by F.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.76 / 1.39
Space group P 3 2 1
Cell size a, b, c (Å), α, β, γ (°) 78.315, 78.315, 55.929, 90, 90, 120
R / Rfree (%) 17.1 / 19

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Kras-G12D Bound to Gdp with Switch 1 Open Conformation (pdb code 7f0w). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Kras-G12D Bound to Gdp with Switch 1 Open Conformation, PDB code: 7f0w:

Magnesium binding site 1 out of 1 in 7f0w

Go back to Magnesium Binding Sites List in 7f0w
Magnesium binding site 1 out of 1 in the Crystal Structure of Kras-G12D Bound to Gdp with Switch 1 Open Conformation


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Kras-G12D Bound to Gdp with Switch 1 Open Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg202

b:27.4
occ:1.00
HB3 A:ALA66 3.0 25.9 1.0
HB2 A:ALA66 3.1 25.9 1.0
CB A:ALA66 3.5 21.6 1.0
H A:ALA66 3.7 23.7 1.0
HB1 A:ALA66 4.1 25.9 1.0
N A:ALA66 4.3 19.8 1.0
CA A:ALA66 4.6 17.5 1.0
HA A:SER65 4.8 20.1 1.0
HG2 A:MET67 4.9 21.9 1.0

Reference:

F.Zhang, F.Zhang. N/A N/A.
Page generated: Wed Oct 2 21:07:47 2024

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