Magnesium in PDB 7f68: Crystal Structure of N-Ras S89D

Enzymatic activity of Crystal Structure of N-Ras S89D

All present enzymatic activity of Crystal Structure of N-Ras S89D:
3.6.5.2;

Protein crystallography data

The structure of Crystal Structure of N-Ras S89D, PDB code: 7f68 was solved by Y.Li, Q.Sun, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.57 / 1.24
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 67.963, 67.963, 78.374, 90, 90, 120
R / Rfree (%) 12.3 / 14.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of N-Ras S89D (pdb code 7f68). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of N-Ras S89D, PDB code: 7f68:

Magnesium binding site 1 out of 1 in 7f68

Go back to Magnesium Binding Sites List in 7f68
Magnesium binding site 1 out of 1 in the Crystal Structure of N-Ras S89D


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of N-Ras S89D within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg202

b:14.2
occ:1.00
O3G A:GTP201 2.0 16.7 1.0
O2B A:GTP201 2.0 14.4 1.0
OG A:SER17 2.1 14.4 1.0
OG1 A:THR35 2.1 15.1 1.0
O A:HOH321 2.1 15.6 1.0
O A:HOH334 2.1 16.0 1.0
CB A:THR35 3.1 14.1 1.0
CB A:SER17 3.2 13.7 1.0
PB A:GTP201 3.2 14.3 1.0
PG A:GTP201 3.2 14.6 1.0
O3B A:GTP201 3.4 14.9 1.0
N A:THR35 3.8 14.6 1.0
N A:SER17 3.8 13.5 1.0
CA A:SER17 4.0 14.3 1.0
CA A:THR35 4.1 14.5 1.0
OD2 A:ASP57 4.1 17.5 1.0
CG2 A:THR35 4.1 16.0 1.0
O1G A:GTP201 4.1 17.6 1.0
O2A A:GTP201 4.2 14.6 1.0
OD1 A:ASP57 4.2 18.1 1.0
O A:HOH327 4.2 19.2 1.0
O3A A:GTP201 4.2 14.0 1.0
O A:ASP33 4.3 15.4 1.0
O1B A:GTP201 4.3 14.4 1.0
O2G A:GTP201 4.3 16.1 1.0
O A:THR58 4.4 15.8 1.0
CG A:ASP57 4.5 16.1 1.0
PA A:GTP201 4.5 14.1 1.0
O1A A:GTP201 4.7 14.4 1.0
CB A:LYS16 4.8 14.8 1.0
C A:PRO34 4.8 15.2 1.0
C A:LYS16 4.9 13.5 1.0
CE A:LYS16 5.0 16.2 1.0

Reference:

Y.Li, Q.Sun. Crystal Structure of N-Ras S89D To Be Published.
Page generated: Wed Apr 5 13:01:11 2023

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