Magnesium in PDB 7fc9: Crystal Structure of CMABCB1 in Lipidic Mesophase Revealed By Lcp-Sfx

The structure of Crystal Structure of CMABCB1 in Lipidic Mesophase Revealed By Lcp-Sfx, PDB code: 7fc9 was solved by D.Pan, R.Oyama, T.Sato, T.Nakane, R.Mizunuma, K.Matsuoka, Y.Joti, K.Tono, E.Nango, S.Iwata, T.Nakatsu, H.Kato, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 2.20
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	74.9, 285.9, 86.8, 90, 90, 90
R / Rfree (%)	19.2 / 21.8

The structure of Crystal Structure of CMABCB1 in Lipidic Mesophase Revealed By Lcp-Sfx also contains other interesting chemical elements:

Chlorine	(Cl)	2 atoms
Zinc	(Zn)	9 atoms

The binding sites of Magnesium atom in the Crystal Structure of CMABCB1 in Lipidic Mesophase Revealed By Lcp-Sfx (pdb code 7fc9). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of CMABCB1 in Lipidic Mesophase Revealed By Lcp-Sfx, PDB code: 7fc9:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of CMABCB1 in Lipidic Mesophase Revealed By Lcp-Sfx


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of CMABCB1 in Lipidic Mesophase Revealed By Lcp-Sfx within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg703 b:30.6 occ:1.00 O A:HOH842 2.0 30.9 1.0 O2G A:ANP701 2.0 32.2 1.0 O2B A:ANP701 2.1 34.2 1.0 OE1 A:GLN529 2.1 35.1 1.0 O A:HOH821 2.1 32.7 1.0 OG A:SER485 2.2 33.4 1.0 CD A:GLN529 3.0 37.4 1.0 CB A:SER485 3.2 32.8 1.0 PG A:ANP701 3.2 34.5 1.0 PB A:ANP701 3.3 34.7 1.0 NE2 A:GLN529 3.3 37.3 1.0 N3B A:ANP701 3.5 34.7 1.0 O1G A:ANP701 3.9 32.3 1.0 O2A A:ANP701 4.0 37.6 1.0 O3A A:ANP701 4.1 35.6 1.0 OD1 A:ASP609 4.1 36.0 1.0 OD2 A:ASP609 4.1 35.8 1.0 N A:SER485 4.2 34.0 1.0 OE2 A:GLU610 4.2 39.2 1.0 CA A:SER485 4.2 34.0 1.0 CG A:GLN529 4.4 37.3 1.0 O3G A:ANP701 4.4 34.4 1.0 O1B A:ANP701 4.5 34.7 1.0 CG A:ASP609 4.5 36.2 1.0 PA A:ANP701 4.6 36.0 1.0 ZN A:ZN702 4.7 39.9 1.0 CB A:GLN529 4.7 36.9 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of CMABCB1 in Lipidic Mesophase Revealed By Lcp-Sfx


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of CMABCB1 in Lipidic Mesophase Revealed By Lcp-Sfx within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg705 b:27.3 occ:1.00 OG A:SER292 2.0 51.1 1.0 OD2 A:ASP227 2.0 47.2 1.0 OE2 A:GLU412 2.1 58.1 1.0 O A:HOH933 2.2 52.6 1.0 OE1 A:GLU412 2.3 59.1 1.0 CD A:GLU412 2.5 57.9 1.0 O A:THR288 2.8 60.9 1.0 CG A:ASP227 3.0 46.3 1.0 CB A:SER292 3.0 51.2 1.0 ZN A:ZN704 3.1 65.6 1.0 OD1 A:ASP227 3.3 50.5 1.0 C A:THR288 3.6 61.4 1.0 CG A:GLU412 4.0 56.7 1.0 CA A:SER292 4.1 50.2 1.0 CB A:THR288 4.1 62.8 1.0 N A:SER292 4.3 48.3 1.0 CA A:THR288 4.3 60.0 1.0 CB A:ASP227 4.3 46.4 1.0 N A:LYS289 4.3 64.0 1.0 CA A:LYS289 4.5 65.4 1.0 CA A:ALA409 4.6 48.6 1.0 CB A:GLU412 4.7 54.1 1.0 CB A:ALA409 4.7 49.8 1.0 OG1 A:THR288 4.8 66.6 1.0 O A:LYS289 5.0 59.3 1.0

D.Pan, R.Oyama, T.Sato, T.Nakane, R.Mizunuma, K.Matsuoka, Y.Joti, K.Tono, E.Nango, S.Iwata, T.Nakatsu, H.Kato. Crystal Structure of CMABCB1 Multi-Drug Exporter in Lipidic Mesophase Revealed By Lcp-Sfx. Iucrj V. 9 134 2022.
ISSN: ESSN 2052-2525
PubMed: 35059217
DOI: 10.1107/S2052252521011611