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Magnesium in PDB 7fgm: The Complex Crystals Structure of the FAF1 UBL1_L-HSP70 Nbd with Adp and Phosphate

Protein crystallography data

The structure of The Complex Crystals Structure of the FAF1 UBL1_L-HSP70 Nbd with Adp and Phosphate, PDB code: 7fgm was solved by E.E.Kim, J.K.Park, S.C.Shin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.76 / 2.20
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 103.335, 103.335, 127.093, 90, 90, 120
R / Rfree (%) 17.5 / 20.6

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Complex Crystals Structure of the FAF1 UBL1_L-HSP70 Nbd with Adp and Phosphate (pdb code 7fgm). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Complex Crystals Structure of the FAF1 UBL1_L-HSP70 Nbd with Adp and Phosphate, PDB code: 7fgm:

Magnesium binding site 1 out of 1 in 7fgm

Go back to Magnesium Binding Sites List in 7fgm
Magnesium binding site 1 out of 1 in the The Complex Crystals Structure of the FAF1 UBL1_L-HSP70 Nbd with Adp and Phosphate


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Complex Crystals Structure of the FAF1 UBL1_L-HSP70 Nbd with Adp and Phosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg402

b:27.8
occ:1.00
O A:HOH581 2.7 15.7 1.0
O3B A:ADP401 2.9 19.4 1.0
O A:TYR15 2.9 14.8 1.0
O A:HOH667 3.1 19.2 1.0
O3A A:ADP401 3.1 19.2 1.0
O1B A:ADP401 3.3 15.9 1.0
PB A:ADP401 3.3 18.2 1.0
OD2 A:ASP10 3.3 17.7 1.0
O2A A:ADP401 3.4 15.0 1.0
PA A:ADP401 3.5 15.4 1.0
O1A A:ADP401 3.6 13.7 1.0
OD1 A:ASP10 3.7 14.6 1.0
CG A:ASP10 3.7 17.7 1.0
O A:HOH733 3.8 20.3 1.0
C A:TYR15 3.8 16.0 1.0
CA A:GLY12 4.0 14.3 1.0
CB A:TYR15 4.4 14.8 1.0
CA A:TYR15 4.5 15.7 1.0
N A:GLY12 4.6 13.9 1.0
N A:TYR15 4.6 14.4 1.0
O1 A:PO4403 4.7 26.9 1.0
N A:SER16 4.7 12.8 1.0
O2B A:ADP401 4.8 24.2 1.0
O A:ASP366 4.8 14.5 1.0
CA A:SER16 4.8 13.7 1.0
O A:HOH524 4.9 14.2 1.0
CB A:ASP10 4.9 13.5 1.0
O A:ASP10 5.0 14.5 1.0

Reference:

E.E.Kim, J.K.Park, S.C.Shin. The Complex Crystals of the FAF1 UBL1_L-HSP70 Nbd with Adp and Phosphate To Be Published.
Page generated: Wed Oct 2 21:34:55 2024

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