Magnesium in PDB 7jm6: Structure of Chicken Clc-7

The structure of Structure of Chicken Clc-7 also contains other interesting chemical elements:

Chlorine

(Cl)

6 atoms

The binding sites of Magnesium atom in the Structure of Chicken Clc-7 (pdb code 7jm6). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of Chicken Clc-7, PDB code: 7jm6:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of Chicken Clc-7


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Chicken Clc-7 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg902 b:22.1 occ:1.00 O1B A:ATP901 1.9 27.0 1.0 OE1 A:GLU90 2.6 27.0 1.0 O1G A:ATP901 2.7 27.0 1.0 O2A A:ATP901 2.8 27.0 1.0 OE2 A:GLU90 3.1 27.0 1.0 CD A:GLU90 3.1 27.0 1.0 PB A:ATP901 3.3 27.0 1.0 HA A:GLU90 3.5 27.0 1.0 HD21 A:ASN654 3.5 27.6 1.0 PA A:ATP901 3.7 27.0 1.0 HD22 A:ASN654 3.8 27.6 1.0 O3B A:ATP901 3.9 27.0 1.0 ND2 A:ASN654 3.9 27.6 1.0 PG A:ATP901 4.0 27.0 1.0 O3A A:ATP901 4.1 27.0 1.0 O1A A:ATP901 4.1 27.0 1.0 O A:TYR89 4.2 29.2 1.0 HD21 A:ASN652 4.3 30.2 1.0 HB3 A:GLU90 4.3 27.0 1.0 CA A:GLU90 4.4 27.0 1.0 CG A:GLU90 4.4 27.0 1.0 O A:LEU87 4.4 32.2 1.0 O A:ASN652 4.4 30.2 1.0 HH11 A:ARG763 4.5 24.3 1.0 O2B A:ATP901 4.5 27.0 1.0 CB A:GLU90 4.6 27.0 1.0 HA A:LEU87 4.7 32.2 1.0 HB3 A:ASN652 4.8 30.2 1.0 HG2 A:GLU90 4.8 27.0 1.0 HG A:LEU87 4.8 32.2 1.0 HE2 A:LYS781 4.8 28.9 1.0 C A:TYR89 4.9 29.2 1.0 O3G A:ATP901 4.9 27.0 1.0 N A:GLU90 4.9 27.0 1.0 HB3 A:LEU87 5.0 32.2 1.0 O2G A:ATP901 5.0 27.0 1.0 HG3 A:GLU90 5.0 27.0 1.0 HE3 A:LYS781 5.0 28.9 1.0

Magnesium binding site 2 out of 2 in the Structure of Chicken Clc-7


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of Chicken Clc-7 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg902 b:22.1 occ:1.00 O1B B:ATP901 1.9 27.0 1.0 OE1 B:GLU90 2.6 27.0 1.0 O1G B:ATP901 2.7 27.0 1.0 O2A B:ATP901 2.8 27.0 1.0 OE2 B:GLU90 3.1 27.0 1.0 CD B:GLU90 3.1 27.0 1.0 PB B:ATP901 3.3 27.0 1.0 HA B:GLU90 3.5 27.0 1.0 HD21 B:ASN654 3.5 27.6 1.0 PA B:ATP901 3.7 27.0 1.0 HD22 B:ASN654 3.8 27.6 1.0 O3B B:ATP901 3.9 27.0 1.0 ND2 B:ASN654 3.9 27.6 1.0 PG B:ATP901 4.0 27.0 1.0 O3A B:ATP901 4.1 27.0 1.0 O1A B:ATP901 4.1 27.0 1.0 O B:TYR89 4.2 29.2 1.0 HD21 B:ASN652 4.3 30.2 1.0 HB3 B:GLU90 4.3 27.0 1.0 CA B:GLU90 4.4 27.0 1.0 CG B:GLU90 4.4 27.0 1.0 O B:ASN652 4.4 30.2 1.0 O B:LEU87 4.4 32.2 1.0 HH11 B:ARG763 4.5 24.3 1.0 O2B B:ATP901 4.5 27.0 1.0 CB B:GLU90 4.6 27.0 1.0 HA B:LEU87 4.7 32.2 1.0 HB3 B:ASN652 4.8 30.2 1.0 HG2 B:GLU90 4.8 27.0 1.0 HG B:LEU87 4.8 32.2 1.0 HE2 B:LYS781 4.8 28.9 1.0 C B:TYR89 4.9 29.2 1.0 O3G B:ATP901 4.9 27.0 1.0 N B:GLU90 4.9 27.0 1.0 HB3 B:LEU87 5.0 32.2 1.0 O2G B:ATP901 5.0 27.0 1.0 HG3 B:GLU90 5.0 27.0 1.0 HE3 B:LYS781 5.0 28.9 1.0

M.Schrecker, J.Korobenko, R.K.Hite. Cryo-Em Structure of the Lysosomal Chloride-Proton Exchanger Clc-7 in Complex with OSTM1. Elife V. 9 2020.
ISSN: ESSN 2050-084X
PubMed: 32749217
DOI: 10.7554/ELIFE.59555