Magnesium in PDB 7jsn: Structure of the Visual Signaling Complex Between Transducin and Phosphodiesterase 6

All present enzymatic activity of Structure of the Visual Signaling Complex Between Transducin and Phosphodiesterase 6:
3.1.4.35;

The structure of Structure of the Visual Signaling Complex Between Transducin and Phosphodiesterase 6 also contains other interesting chemical elements:

Zinc

(Zn)

2 atoms

The binding sites of Magnesium atom in the Structure of the Visual Signaling Complex Between Transducin and Phosphodiesterase 6 (pdb code 7jsn). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of the Visual Signaling Complex Between Transducin and Phosphodiesterase 6, PDB code: 7jsn:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of the Visual Signaling Complex Between Transducin and Phosphodiesterase 6


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Visual Signaling Complex Between Transducin and Phosphodiesterase 6 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg902 b:42.4 occ:1.00 OD1 A:ASP600 2.5 40.7 1.0 CG A:ASP600 3.5 40.7 1.0 HG23 A:THR669 3.7 48.4 1.0 OD2 A:ASP600 3.8 40.7 1.0 HG21 A:THR669 4.2 48.4 1.0 HD2 A:HIS631 4.2 42.0 1.0 HD2 A:HIS599 4.4 40.2 1.0 HA A:ASP600 4.4 40.7 1.0 CG2 A:THR669 4.4 48.4 1.0 HG3 A:GLU628 4.4 46.8 1.0 NE2 A:HIS631 4.5 42.0 1.0 HE2 A:HIS603 4.5 41.1 1.0 HG1 A:THR669 4.5 48.4 1.0 CD2 A:HIS631 4.7 42.0 1.0 ZN A:ZN901 4.7 60.6 1.0 OE2 A:GLU628 4.8 46.8 1.0 CB A:ASP600 4.8 40.7 1.0 CD2 A:HIS599 4.8 40.2 1.0 HD2 A:HIS603 4.8 41.1 1.0 OG1 A:THR669 4.9 48.4 1.0 NE2 A:HIS603 5.0 41.1 1.0

Magnesium binding site 2 out of 2 in the Structure of the Visual Signaling Complex Between Transducin and Phosphodiesterase 6


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of the Visual Signaling Complex Between Transducin and Phosphodiesterase 6 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg902 b:69.2 occ:1.00 OD1 B:ASP598 2.5 44.6 1.0 CG B:ASP598 3.3 44.6 1.0 OD2 B:ASP598 3.3 44.6 1.0 HE1 B:HIS629 3.9 43.8 1.0 HD2 B:HIS597 4.0 45.3 1.0 OE2 B:GLU626 4.4 49.8 1.0 HG3 B:GLU626 4.4 49.8 1.0 HB B:THR667 4.5 52.1 1.0 ZN B:ZN901 4.5 56.5 1.0 CE1 B:HIS629 4.7 43.8 1.0 HE2 B:HIS557 4.7 46.0 1.0 OG1 B:THR667 4.7 52.1 1.0 O B:HIS597 4.7 45.3 1.0 CB B:ASP598 4.7 44.6 1.0 CD2 B:HIS597 4.8 45.3 1.0 HA B:ASP598 4.9 44.6 1.0 HE2 B:HIS601 5.0 43.6 1.0 CD B:GLU626 5.0 49.8 1.0

Y.Gao, G.Eskici, S.Ramachandran, F.Poitevin, A.B.Seven, O.Panova, G.Skiniotis, R.A.Cerione. Structure of the Visual Signaling Complex Between Transducin and Phosphodiesterase 6. Mol.Cell V. 80 237 2020.
ISSN: ISSN 1097-2765
PubMed: 33007200
DOI: 10.1016/J.MOLCEL.2020.09.013