Magnesium in PDB 7kch: Myosin XI-F-Actin Complex
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Myosin XI-F-Actin Complex
(pdb code 7kch). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the
Myosin XI-F-Actin Complex, PDB code: 7kch:
Jump to Magnesium binding site number:
1;
2;
3;
Magnesium binding site 1 out
of 3 in 7kch
Go back to
Magnesium Binding Sites List in 7kch
Magnesium binding site 1 out
of 3 in the Myosin XI-F-Actin Complex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Myosin XI-F-Actin Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Mg402
b:94.0
occ:1.00
|
O
|
G:GLY13
|
3.1
|
93.7
|
1.0
|
O3B
|
G:ADP401
|
3.1
|
87.1
|
1.0
|
O
|
G:LEU16
|
3.1
|
77.5
|
1.0
|
O3A
|
G:ADP401
|
3.1
|
87.1
|
1.0
|
N
|
G:LEU16
|
3.1
|
77.5
|
1.0
|
N
|
G:GLY15
|
3.2
|
76.9
|
1.0
|
O2B
|
G:ADP401
|
3.2
|
87.1
|
1.0
|
C
|
G:GLY13
|
3.4
|
93.7
|
1.0
|
PB
|
G:ADP401
|
3.4
|
87.1
|
1.0
|
CA
|
G:GLY15
|
3.5
|
76.9
|
1.0
|
O
|
G:ASN12
|
3.6
|
104.5
|
1.0
|
NZ
|
G:LYS18
|
3.6
|
80.5
|
1.0
|
C
|
G:LEU16
|
3.6
|
77.5
|
1.0
|
CA
|
G:GLY13
|
3.6
|
93.7
|
1.0
|
C
|
G:GLY15
|
3.7
|
76.9
|
1.0
|
OD2
|
G:ASP11
|
3.9
|
94.7
|
1.0
|
CA
|
G:LEU16
|
4.0
|
77.5
|
1.0
|
N
|
G:SER14
|
4.1
|
83.0
|
1.0
|
CE
|
G:LYS18
|
4.1
|
80.5
|
1.0
|
C
|
G:ASN12
|
4.2
|
104.5
|
1.0
|
OD1
|
G:ASP157
|
4.2
|
82.3
|
1.0
|
PA
|
G:ADP401
|
4.3
|
87.1
|
1.0
|
N
|
G:GLY13
|
4.3
|
93.7
|
1.0
|
C
|
G:SER14
|
4.4
|
83.0
|
1.0
|
O2A
|
G:ADP401
|
4.4
|
87.1
|
1.0
|
N
|
G:VAL17
|
4.5
|
80.5
|
1.0
|
O5'
|
G:ADP401
|
4.5
|
87.1
|
1.0
|
CB
|
G:LEU16
|
4.7
|
77.5
|
1.0
|
O
|
G:GLY15
|
4.7
|
76.9
|
1.0
|
CA
|
G:SER14
|
4.8
|
83.0
|
1.0
|
CG
|
G:ASP11
|
4.8
|
94.7
|
1.0
|
O1B
|
G:ADP401
|
4.9
|
87.1
|
1.0
|
CA
|
G:VAL17
|
4.9
|
80.5
|
1.0
|
|
Magnesium binding site 2 out
of 3 in 7kch
Go back to
Magnesium Binding Sites List in 7kch
Magnesium binding site 2 out
of 3 in the Myosin XI-F-Actin Complex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Myosin XI-F-Actin Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg402
b:94.0
occ:1.00
|
O
|
B:GLY13
|
3.1
|
93.7
|
1.0
|
O3B
|
B:ADP401
|
3.1
|
87.1
|
1.0
|
O
|
B:LEU16
|
3.1
|
77.5
|
1.0
|
O3A
|
B:ADP401
|
3.1
|
87.1
|
1.0
|
N
|
B:LEU16
|
3.1
|
77.5
|
1.0
|
N
|
B:GLY15
|
3.2
|
76.9
|
1.0
|
O2B
|
B:ADP401
|
3.2
|
87.1
|
1.0
|
C
|
B:GLY13
|
3.4
|
93.7
|
1.0
|
PB
|
B:ADP401
|
3.4
|
87.1
|
1.0
|
CA
|
B:GLY15
|
3.5
|
76.9
|
1.0
|
O
|
B:ASN12
|
3.6
|
104.5
|
1.0
|
NZ
|
B:LYS18
|
3.6
|
80.5
|
1.0
|
C
|
B:LEU16
|
3.6
|
77.5
|
1.0
|
CA
|
B:GLY13
|
3.6
|
93.7
|
1.0
|
C
|
B:GLY15
|
3.7
|
76.9
|
1.0
|
OD2
|
B:ASP11
|
3.9
|
94.7
|
1.0
|
CA
|
B:LEU16
|
4.0
|
77.5
|
1.0
|
N
|
B:SER14
|
4.1
|
83.0
|
1.0
|
CE
|
B:LYS18
|
4.2
|
80.5
|
1.0
|
C
|
B:ASN12
|
4.2
|
104.5
|
1.0
|
OD1
|
B:ASP157
|
4.2
|
82.3
|
1.0
|
PA
|
B:ADP401
|
4.3
|
87.1
|
1.0
|
N
|
B:GLY13
|
4.3
|
93.7
|
1.0
|
C
|
B:SER14
|
4.4
|
83.0
|
1.0
|
O2A
|
B:ADP401
|
4.4
|
87.1
|
1.0
|
N
|
B:VAL17
|
4.5
|
80.5
|
1.0
|
O5'
|
B:ADP401
|
4.5
|
87.1
|
1.0
|
CB
|
B:LEU16
|
4.7
|
77.5
|
1.0
|
O
|
B:GLY15
|
4.7
|
76.9
|
1.0
|
CA
|
B:SER14
|
4.8
|
83.0
|
1.0
|
CG
|
B:ASP11
|
4.8
|
94.7
|
1.0
|
O1B
|
B:ADP401
|
4.9
|
87.1
|
1.0
|
CA
|
B:VAL17
|
4.9
|
80.5
|
1.0
|
|
Magnesium binding site 3 out
of 3 in 7kch
Go back to
Magnesium Binding Sites List in 7kch
Magnesium binding site 3 out
of 3 in the Myosin XI-F-Actin Complex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Myosin XI-F-Actin Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg402
b:94.0
occ:1.00
|
O
|
C:GLY13
|
3.1
|
93.7
|
1.0
|
O3B
|
C:ADP401
|
3.1
|
87.1
|
1.0
|
O
|
C:LEU16
|
3.1
|
77.5
|
1.0
|
O3A
|
C:ADP401
|
3.1
|
87.1
|
1.0
|
N
|
C:LEU16
|
3.1
|
77.5
|
1.0
|
N
|
C:GLY15
|
3.2
|
76.9
|
1.0
|
O2B
|
C:ADP401
|
3.2
|
87.1
|
1.0
|
C
|
C:GLY13
|
3.4
|
93.7
|
1.0
|
PB
|
C:ADP401
|
3.4
|
87.1
|
1.0
|
CA
|
C:GLY15
|
3.5
|
76.9
|
1.0
|
O
|
C:ASN12
|
3.6
|
104.5
|
1.0
|
NZ
|
C:LYS18
|
3.6
|
80.5
|
1.0
|
C
|
C:LEU16
|
3.6
|
77.5
|
1.0
|
CA
|
C:GLY13
|
3.6
|
93.7
|
1.0
|
C
|
C:GLY15
|
3.7
|
76.9
|
1.0
|
OD2
|
C:ASP11
|
3.9
|
94.7
|
1.0
|
CA
|
C:LEU16
|
4.0
|
77.5
|
1.0
|
N
|
C:SER14
|
4.1
|
83.0
|
1.0
|
CE
|
C:LYS18
|
4.2
|
80.5
|
1.0
|
C
|
C:ASN12
|
4.2
|
104.5
|
1.0
|
OD1
|
C:ASP157
|
4.2
|
82.3
|
1.0
|
PA
|
C:ADP401
|
4.3
|
87.1
|
1.0
|
N
|
C:GLY13
|
4.3
|
93.7
|
1.0
|
C
|
C:SER14
|
4.4
|
83.0
|
1.0
|
O2A
|
C:ADP401
|
4.4
|
87.1
|
1.0
|
N
|
C:VAL17
|
4.5
|
80.5
|
1.0
|
O5'
|
C:ADP401
|
4.5
|
87.1
|
1.0
|
CB
|
C:LEU16
|
4.7
|
77.5
|
1.0
|
O
|
C:GLY15
|
4.7
|
76.9
|
1.0
|
CA
|
C:SER14
|
4.8
|
83.0
|
1.0
|
CG
|
C:ASP11
|
4.8
|
94.7
|
1.0
|
O1B
|
C:ADP401
|
4.9
|
87.1
|
1.0
|
CA
|
C:VAL17
|
4.9
|
80.5
|
1.0
|
|
Reference:
R.Gong,
G.M.Alushin.
Cryo-Em Structure of the Myosin XI-F-Actin Complex To Be Published.
Page generated: Wed Oct 2 22:11:43 2024
|