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Magnesium in PDB 7kch: Myosin XI-F-Actin Complex

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Myosin XI-F-Actin Complex (pdb code 7kch). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the Myosin XI-F-Actin Complex, PDB code: 7kch:
Jump to Magnesium binding site number: 1; 2; 3;

Magnesium binding site 1 out of 3 in 7kch

Go back to Magnesium Binding Sites List in 7kch
Magnesium binding site 1 out of 3 in the Myosin XI-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Myosin XI-F-Actin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Mg402

b:94.0
occ:1.00
O G:GLY13 3.1 93.7 1.0
O3B G:ADP401 3.1 87.1 1.0
O G:LEU16 3.1 77.5 1.0
O3A G:ADP401 3.1 87.1 1.0
N G:LEU16 3.1 77.5 1.0
N G:GLY15 3.2 76.9 1.0
O2B G:ADP401 3.2 87.1 1.0
C G:GLY13 3.4 93.7 1.0
PB G:ADP401 3.4 87.1 1.0
CA G:GLY15 3.5 76.9 1.0
O G:ASN12 3.6 104.5 1.0
NZ G:LYS18 3.6 80.5 1.0
C G:LEU16 3.6 77.5 1.0
CA G:GLY13 3.6 93.7 1.0
C G:GLY15 3.7 76.9 1.0
OD2 G:ASP11 3.9 94.7 1.0
CA G:LEU16 4.0 77.5 1.0
N G:SER14 4.1 83.0 1.0
CE G:LYS18 4.1 80.5 1.0
C G:ASN12 4.2 104.5 1.0
OD1 G:ASP157 4.2 82.3 1.0
PA G:ADP401 4.3 87.1 1.0
N G:GLY13 4.3 93.7 1.0
C G:SER14 4.4 83.0 1.0
O2A G:ADP401 4.4 87.1 1.0
N G:VAL17 4.5 80.5 1.0
O5' G:ADP401 4.5 87.1 1.0
CB G:LEU16 4.7 77.5 1.0
O G:GLY15 4.7 76.9 1.0
CA G:SER14 4.8 83.0 1.0
CG G:ASP11 4.8 94.7 1.0
O1B G:ADP401 4.9 87.1 1.0
CA G:VAL17 4.9 80.5 1.0

Magnesium binding site 2 out of 3 in 7kch

Go back to Magnesium Binding Sites List in 7kch
Magnesium binding site 2 out of 3 in the Myosin XI-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Myosin XI-F-Actin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg402

b:94.0
occ:1.00
O B:GLY13 3.1 93.7 1.0
O3B B:ADP401 3.1 87.1 1.0
O B:LEU16 3.1 77.5 1.0
O3A B:ADP401 3.1 87.1 1.0
N B:LEU16 3.1 77.5 1.0
N B:GLY15 3.2 76.9 1.0
O2B B:ADP401 3.2 87.1 1.0
C B:GLY13 3.4 93.7 1.0
PB B:ADP401 3.4 87.1 1.0
CA B:GLY15 3.5 76.9 1.0
O B:ASN12 3.6 104.5 1.0
NZ B:LYS18 3.6 80.5 1.0
C B:LEU16 3.6 77.5 1.0
CA B:GLY13 3.6 93.7 1.0
C B:GLY15 3.7 76.9 1.0
OD2 B:ASP11 3.9 94.7 1.0
CA B:LEU16 4.0 77.5 1.0
N B:SER14 4.1 83.0 1.0
CE B:LYS18 4.2 80.5 1.0
C B:ASN12 4.2 104.5 1.0
OD1 B:ASP157 4.2 82.3 1.0
PA B:ADP401 4.3 87.1 1.0
N B:GLY13 4.3 93.7 1.0
C B:SER14 4.4 83.0 1.0
O2A B:ADP401 4.4 87.1 1.0
N B:VAL17 4.5 80.5 1.0
O5' B:ADP401 4.5 87.1 1.0
CB B:LEU16 4.7 77.5 1.0
O B:GLY15 4.7 76.9 1.0
CA B:SER14 4.8 83.0 1.0
CG B:ASP11 4.8 94.7 1.0
O1B B:ADP401 4.9 87.1 1.0
CA B:VAL17 4.9 80.5 1.0

Magnesium binding site 3 out of 3 in 7kch

Go back to Magnesium Binding Sites List in 7kch
Magnesium binding site 3 out of 3 in the Myosin XI-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Myosin XI-F-Actin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg402

b:94.0
occ:1.00
O C:GLY13 3.1 93.7 1.0
O3B C:ADP401 3.1 87.1 1.0
O C:LEU16 3.1 77.5 1.0
O3A C:ADP401 3.1 87.1 1.0
N C:LEU16 3.1 77.5 1.0
N C:GLY15 3.2 76.9 1.0
O2B C:ADP401 3.2 87.1 1.0
C C:GLY13 3.4 93.7 1.0
PB C:ADP401 3.4 87.1 1.0
CA C:GLY15 3.5 76.9 1.0
O C:ASN12 3.6 104.5 1.0
NZ C:LYS18 3.6 80.5 1.0
C C:LEU16 3.6 77.5 1.0
CA C:GLY13 3.6 93.7 1.0
C C:GLY15 3.7 76.9 1.0
OD2 C:ASP11 3.9 94.7 1.0
CA C:LEU16 4.0 77.5 1.0
N C:SER14 4.1 83.0 1.0
CE C:LYS18 4.2 80.5 1.0
C C:ASN12 4.2 104.5 1.0
OD1 C:ASP157 4.2 82.3 1.0
PA C:ADP401 4.3 87.1 1.0
N C:GLY13 4.3 93.7 1.0
C C:SER14 4.4 83.0 1.0
O2A C:ADP401 4.4 87.1 1.0
N C:VAL17 4.5 80.5 1.0
O5' C:ADP401 4.5 87.1 1.0
CB C:LEU16 4.7 77.5 1.0
O C:GLY15 4.7 76.9 1.0
CA C:SER14 4.8 83.0 1.0
CG C:ASP11 4.8 94.7 1.0
O1B C:ADP401 4.9 87.1 1.0
CA C:VAL17 4.9 80.5 1.0

Reference:

R.Gong, G.M.Alushin. Cryo-Em Structure of the Myosin XI-F-Actin Complex To Be Published.
Page generated: Wed Oct 2 22:11:43 2024

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