Magnesium in PDB 7khe: Escherichia Coli Rna Polymerase and RRNBP1 Promoter Pre-Open Complex with Dksa/Ppgpp

All present enzymatic activity of Escherichia Coli Rna Polymerase and RRNBP1 Promoter Pre-Open Complex with Dksa/Ppgpp:
2.7.7.6;

The structure of Escherichia Coli Rna Polymerase and RRNBP1 Promoter Pre-Open Complex with Dksa/Ppgpp also contains other interesting chemical elements:

Zinc

(Zn)

3 atoms

The binding sites of Magnesium atom in the Escherichia Coli Rna Polymerase and RRNBP1 Promoter Pre-Open Complex with Dksa/Ppgpp (pdb code 7khe). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Escherichia Coli Rna Polymerase and RRNBP1 Promoter Pre-Open Complex with Dksa/Ppgpp, PDB code: 7khe:

Magnesium binding site 1 out of 1 in the Escherichia Coli Rna Polymerase and RRNBP1 Promoter Pre-Open Complex with Dksa/Ppgpp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Escherichia Coli Rna Polymerase and RRNBP1 Promoter Pre-Open Complex with Dksa/Ppgpp within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg2001 b:48.3 occ:1.00 OD1 D:ASP464 2.2 51.6 1.0 OD1 D:ASP462 2.2 52.7 1.0 OD2 D:ASP464 2.3 51.6 1.0 CG D:ASP464 2.6 51.6 1.0 OD2 D:ASP462 2.8 52.7 1.0 CG D:ASP462 2.8 52.7 1.0 O D:ASP460 3.9 53.2 1.0 CB D:ASP464 4.0 51.6 1.0 CB D:ASP460 4.1 53.2 1.0 NH2 D:ARG425 4.2 53.1 1.0 CB D:ASP462 4.3 52.7 1.0 O M:PRO70 4.3 64.0 1.0 C D:ASP460 4.5 53.2 1.0 N D:ASP464 4.6 51.6 1.0 N D:ASP462 4.6 52.7 1.0 O D:ASP462 4.6 52.7 1.0 CA D:ASP460 4.7 53.2 1.0 CA D:ASP464 4.8 51.6 1.0 OD1 D:ASP460 4.8 53.2 1.0 C D:ASP462 4.8 52.7 1.0 CG D:ASP460 4.8 53.2 1.0 CA D:ASP462 4.8 52.7 1.0 N D:ASP460 4.8 53.2 1.0

Y.Shin, M.Z.Qayyum, K.S.Murakami. Escherichia Coli Rna Polymerase and RRNBP1 Promoter Pre-Open Complex with Dksa/Ppgpp To Be Published.