Magnesium in PDB 7kjw: Structure of Hiv-1 Reverse Transcriptase Initiation Complex Core with Efavirenz

Enzymatic activity of Structure of Hiv-1 Reverse Transcriptase Initiation Complex Core with Efavirenz

All present enzymatic activity of Structure of Hiv-1 Reverse Transcriptase Initiation Complex Core with Efavirenz:
2.7.7.49; 2.7.7.7; 3.1.26.13;

Other elements in 7kjw:

The structure of Structure of Hiv-1 Reverse Transcriptase Initiation Complex Core with Efavirenz also contains other interesting chemical elements:

Fluorine (F) 3 atoms
Chlorine (Cl) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of Hiv-1 Reverse Transcriptase Initiation Complex Core with Efavirenz (pdb code 7kjw). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Hiv-1 Reverse Transcriptase Initiation Complex Core with Efavirenz, PDB code: 7kjw:

Magnesium binding site 1 out of 1 in 7kjw

Go back to Magnesium Binding Sites List in 7kjw
Magnesium binding site 1 out of 1 in the Structure of Hiv-1 Reverse Transcriptase Initiation Complex Core with Efavirenz


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Hiv-1 Reverse Transcriptase Initiation Complex Core with Efavirenz within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg601

b:47.0
occ:1.00
OD2 A:ASP443 2.8 36.5 1.0
OD1 A:ASP549 3.1 38.6 1.0
CG A:ASP443 3.7 36.5 1.0
OD1 A:ASP443 3.9 36.5 1.0
CG A:ASP549 3.9 38.6 1.0
OD2 A:ASP549 4.1 38.6 1.0
NE2 A:GLN478 4.2 41.9 1.0
O A:GLY444 4.3 40.6 1.0
OP1 C:U200 4.6 79.4 1.0
CE1 A:HIS539 4.6 42.1 1.0
OD2 A:ASP498 4.7 35.9 1.0
C5' C:U200 4.8 79.4 1.0
C A:GLY444 4.8 40.6 1.0
CB A:ASP443 4.9 36.5 1.0

Reference:

B.Ha, K.P.Larsen, J.Zhang, Z.Fu, E.Montabana, L.N.Jackson, D.H.Chen, E.V.Puglisi. High-Resolution View of Hiv-1 Reverse Transcriptase Initiation and Its Inhibition By Nnrti Drugs To Be Published.
Page generated: Sat Apr 3 17:27:00 2021

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