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Magnesium in PDB 7kl1: Cocrystal Structure of Human Camkii-Alpha (CAMK2A)Kinase Domain and GLUN2B(S1303D) in Complex with Atp

Enzymatic activity of Cocrystal Structure of Human Camkii-Alpha (CAMK2A)Kinase Domain and GLUN2B(S1303D) in Complex with Atp

All present enzymatic activity of Cocrystal Structure of Human Camkii-Alpha (CAMK2A)Kinase Domain and GLUN2B(S1303D) in Complex with Atp:
2.7.11.17;

Protein crystallography data

The structure of Cocrystal Structure of Human Camkii-Alpha (CAMK2A)Kinase Domain and GLUN2B(S1303D) in Complex with Atp, PDB code: 7kl1 was solved by C.Ozden, M.M.Stratton, S.C.Garman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.50 / 2.40
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 72.893, 92.133, 91.338, 90.00, 90.00, 90.00
R / Rfree (%) 19 / 26.5

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cocrystal Structure of Human Camkii-Alpha (CAMK2A)Kinase Domain and GLUN2B(S1303D) in Complex with Atp (pdb code 7kl1). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Cocrystal Structure of Human Camkii-Alpha (CAMK2A)Kinase Domain and GLUN2B(S1303D) in Complex with Atp, PDB code: 7kl1:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7kl1

Go back to Magnesium Binding Sites List in 7kl1
Magnesium binding site 1 out of 2 in the Cocrystal Structure of Human Camkii-Alpha (CAMK2A)Kinase Domain and GLUN2B(S1303D) in Complex with Atp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cocrystal Structure of Human Camkii-Alpha (CAMK2A)Kinase Domain and GLUN2B(S1303D) in Complex with Atp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg307

b:42.9
occ:1.00
O2B A:ATP306 2.0 54.1 1.0
OD2 A:ASP156 2.3 30.2 1.0
OD1 A:ASN140 2.5 20.6 1.0
O5' A:ATP306 2.8 47.3 1.0
PB A:ATP306 3.1 70.4 1.0
O3A A:ATP306 3.2 44.3 1.0
PA A:ATP306 3.3 42.0 1.0
O2A A:ATP306 3.3 36.5 1.0
CG A:ASP156 3.5 34.6 1.0
CG A:ASN140 3.6 21.2 1.0
O A:GLU139 3.7 26.5 1.0
O1G A:ATP306 3.9 67.8 1.0
O3B A:ATP306 3.9 54.4 1.0
C3' A:ATP306 4.1 36.6 1.0
C5' A:ATP306 4.1 38.2 1.0
ND2 A:ASN140 4.2 17.9 1.0
C A:GLU139 4.3 21.2 1.0
CB A:ASP156 4.3 26.1 1.0
O1B A:ATP306 4.4 55.7 1.0
PG A:ATP306 4.5 65.0 1.0
OD1 A:ASP156 4.5 33.5 1.0
C2' A:ATP306 4.5 35.9 1.0
CB A:GLU139 4.5 19.9 1.0
CA A:ASN140 4.6 22.7 1.0
N A:ASN140 4.6 23.8 1.0
OE1 A:GLU96 4.7 43.1 1.0
C4' A:ATP306 4.7 39.4 1.0
CB A:ASN140 4.7 21.8 1.0
O1A A:ATP306 4.7 59.0 1.0
O2G A:ATP306 4.8 76.9 1.0
CE A:LYS137 4.8 19.7 1.0

Magnesium binding site 2 out of 2 in 7kl1

Go back to Magnesium Binding Sites List in 7kl1
Magnesium binding site 2 out of 2 in the Cocrystal Structure of Human Camkii-Alpha (CAMK2A)Kinase Domain and GLUN2B(S1303D) in Complex with Atp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cocrystal Structure of Human Camkii-Alpha (CAMK2A)Kinase Domain and GLUN2B(S1303D) in Complex with Atp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg308

b:27.6
occ:1.00
OD2 B:ASP156 1.9 20.4 1.0
O B:HOH420 2.1 17.2 1.0
OD1 B:ASN140 2.1 17.9 1.0
O2B B:ATP307 2.1 25.1 1.0
O2A B:ATP307 2.1 24.1 1.0
O B:HOH407 2.2 16.4 1.0
CG B:ASP156 3.0 22.8 1.0
CG B:ASN140 3.2 18.8 1.0
PB B:ATP307 3.3 31.1 1.0
PA B:ATP307 3.3 26.4 1.0
O3A B:ATP307 3.4 24.2 1.0
CB B:ASP156 3.5 21.1 1.0
ND2 B:ASN140 3.8 18.7 1.0
O B:GLU139 4.0 20.7 1.0
O1G B:ATP307 4.0 35.0 1.0
OD1 B:ASP156 4.1 22.5 1.0
O3B B:ATP307 4.2 28.5 1.0
O5' B:ATP307 4.2 26.2 1.0
C5' B:ATP307 4.2 26.8 1.0
C3' B:ATP307 4.3 25.3 1.0
O1B B:ATP307 4.4 27.0 1.0
O1A B:ATP307 4.4 29.3 1.0
CB B:ASN140 4.5 18.4 1.0
C B:GLU139 4.5 22.1 1.0
C2' B:ATP307 4.5 25.0 1.0
CA B:ASN140 4.6 18.3 1.0
OE1 B:GLU96 4.6 24.9 1.0
PG B:ATP307 4.6 33.3 1.0
O3G B:ATP307 4.8 30.2 1.0
N B:ASN140 4.8 19.6 1.0
CB B:GLU139 4.8 20.1 1.0
C4' B:ATP307 4.8 28.1 1.0

Reference:

C.Ozden, M.M.Stratton, S.C.Garman. Cocrystal Structure of Human Camkii-Alpha (CAMK2A)Kinase Domain and GLUN2B(S1303D) in Complex with Atp To Be Published.
Page generated: Wed Oct 2 22:22:40 2024

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