Magnesium in PDB 7krp: Structure of Sars-Cov-2 Backtracked Complex Complex Bound to NSP13 Helicase - Btc (Local Refinement)

Enzymatic activity of Structure of Sars-Cov-2 Backtracked Complex Complex Bound to NSP13 Helicase - Btc (Local Refinement)

All present enzymatic activity of Structure of Sars-Cov-2 Backtracked Complex Complex Bound to NSP13 Helicase - Btc (Local Refinement):
2.7.7.48;

Other elements in 7krp:

The structure of Structure of Sars-Cov-2 Backtracked Complex Complex Bound to NSP13 Helicase - Btc (Local Refinement) also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of Sars-Cov-2 Backtracked Complex Complex Bound to NSP13 Helicase - Btc (Local Refinement) (pdb code 7krp). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Sars-Cov-2 Backtracked Complex Complex Bound to NSP13 Helicase - Btc (Local Refinement), PDB code: 7krp:

Magnesium binding site 1 out of 1 in 7krp

Go back to Magnesium Binding Sites List in 7krp
Magnesium binding site 1 out of 1 in the Structure of Sars-Cov-2 Backtracked Complex Complex Bound to NSP13 Helicase - Btc (Local Refinement)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Sars-Cov-2 Backtracked Complex Complex Bound to NSP13 Helicase - Btc (Local Refinement) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1003

b:33.6
occ:1.00
O2A A:ADP1004 1.8 40.0 1.0
OD1 A:ASN209 2.0 23.7 1.0
OD2 A:ASP218 2.1 30.9 1.0
O1B A:ADP1004 2.1 40.0 1.0
CG A:ASP218 2.7 30.9 1.0
PB A:ADP1004 2.8 40.0 1.0
O2B A:ADP1004 2.9 40.0 1.0
CG A:ASN209 2.9 23.7 1.0
PA A:ADP1004 2.9 40.0 1.0
CB A:ASP218 3.0 30.9 1.0
O3A A:ADP1004 3.3 40.0 1.0
ND2 A:ASN209 3.5 23.7 1.0
O1A A:ADP1004 3.7 40.0 1.0
OD1 A:ASP218 3.7 30.9 1.0
CB A:ASN209 4.0 23.7 1.0
OD2 A:ASP208 4.1 22.2 1.0
O A:ASP208 4.2 22.2 1.0
O5' A:ADP1004 4.2 40.0 1.0
O3B A:ADP1004 4.3 40.0 1.0
CA A:ASP218 4.4 30.9 1.0
CA A:ASN209 4.4 23.7 1.0
C5' A:ADP1004 4.5 40.0 1.0
C A:ASP208 4.8 22.2 1.0
CE2 A:TYR217 4.9 26.7 1.0
N A:ASN209 4.9 23.7 1.0
CG A:ASP208 5.0 22.2 1.0

Reference:

B.Malone, J.Chen, Q.Wang, E.C.Llewellyn, Y.J.Choi, P.D.B.Olinares, X.Cao, C.Hernandez, E.Eng, B.T.Chait, D.E.Shaw, R.Landick, S.A.Darst, E.A.Campbell. Structural Basis For Backtracking By the Sars-Cov-2 Replication-Transcription Complex Proc.Natl.Acad.Sci.Usa 2021.
ISSN: ESSN 1091-6490
Page generated: Sun Jul 11 17:43:32 2021

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