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Magnesium in PDB 7kw7: Atomic Cryoem Structure of HSP90-HSP70-Hop-Gr

Other elements in 7kw7:

The structure of Atomic Cryoem Structure of HSP90-HSP70-Hop-Gr also contains other interesting chemical elements:

Potassium (K) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Atomic Cryoem Structure of HSP90-HSP70-Hop-Gr (pdb code 7kw7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Atomic Cryoem Structure of HSP90-HSP70-Hop-Gr, PDB code: 7kw7:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7kw7

Go back to Magnesium Binding Sites List in 7kw7
Magnesium binding site 1 out of 2 in the Atomic Cryoem Structure of HSP90-HSP70-Hop-Gr


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Atomic Cryoem Structure of HSP90-HSP70-Hop-Gr within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg702

b:146.2
occ:1.00
OE2 C:GLU175 1.6 151.6 1.0
OD2 C:ASP199 1.6 146.6 1.0
OE1 C:GLU175 1.7 147.9 1.0
OD1 C:ASP199 1.8 147.9 1.0
CD C:GLU175 1.9 151.2 1.0
CG C:ASP199 2.1 146.6 1.0
CG C:GLU175 3.5 131.4 1.0
CB C:ASP199 3.6 139.1 1.0
HG2 C:GLU175 3.8 157.7 1.0
HG3 C:GLU175 4.0 157.7 1.0
HB3 C:ASP199 4.0 166.9 1.0
HB2 C:ASP199 4.1 166.9 1.0
HG12 C:VAL337 4.2 156.9 1.0
HG11 C:VAL337 4.3 156.9 1.0
HB3 C:GLU175 4.3 125.8 1.0
HG1 C:THR204 4.3 173.6 1.0
O1B C:ADP701 4.3 132.2 1.0
CB C:GLU175 4.4 104.8 1.0
HB2 C:ASP206 4.4 165.4 1.0
HB2 C:GLU175 4.5 125.8 1.0
CA C:ASP199 4.6 133.0 1.0
O C:ASP199 4.7 136.2 1.0
HA C:ASP199 4.7 159.6 1.0
CG1 C:VAL337 4.8 130.8 1.0
OG1 C:THR204 4.8 144.6 1.0
C C:ASP199 4.8 135.8 1.0
OD2 C:ASP206 4.9 145.0 1.0
HA3 C:GLY201 5.0 176.5 1.0
HG3 C:PRO147 5.0 125.3 1.0

Magnesium binding site 2 out of 2 in 7kw7

Go back to Magnesium Binding Sites List in 7kw7
Magnesium binding site 2 out of 2 in the Atomic Cryoem Structure of HSP90-HSP70-Hop-Gr


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Atomic Cryoem Structure of HSP90-HSP70-Hop-Gr within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg702

b:105.5
occ:1.00
OD2 D:ASP199 1.6 93.2 1.0
OE1 D:GLU175 1.6 101.4 1.0
OE2 D:GLU175 1.7 95.0 1.0
CD D:GLU175 2.0 103.6 1.0
O2B D:ADP701 2.0 81.8 1.0
CG D:ASP199 2.7 92.2 1.0
OD1 D:ASP199 3.2 89.3 1.0
CG D:GLU175 3.6 81.7 1.0
PB D:ADP701 3.6 67.6 1.0
HG2 D:GLU175 4.0 98.0 1.0
CB D:ASP199 4.0 75.7 1.0
HG3 D:GLU175 4.1 98.0 1.0
HB3 D:ASP199 4.1 90.8 1.0
HG12 D:VAL337 4.3 78.9 1.0
O3A D:ADP701 4.3 72.3 1.0
HB2 D:ASP199 4.3 90.8 1.0
O3B D:ADP701 4.3 65.3 1.0
O1B D:ADP701 4.5 67.3 1.0
HB3 D:GLU175 4.5 72.0 1.0
HG11 D:VAL337 4.5 78.9 1.0
HB2 D:GLU175 4.5 72.0 1.0
CB D:GLU175 4.5 60.0 1.0
HA3 D:GLY201 4.6 98.2 1.0
HB2 D:ASP206 4.6 90.8 1.0
HG21 D:VAL369 4.6 76.6 1.0
OD2 D:ASP206 4.6 84.0 1.0
CG1 D:VAL337 4.9 65.7 1.0
HG1 D:THR204 4.9 104.4 1.0

Reference:

R.Y.Wang, N.M.Chari, E.Kirschke, A.Myasnikov, J.L.Johnson, D.A.Agard. Gr Chaperone Cycle Mechanism Revealed By Cryo-Em: Inactivation of Gr By Gr:HSP90:HSP70:Hop Client-Loading Complex To Be Published.
Page generated: Wed Oct 2 22:56:22 2024

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