Magnesium in PDB 7ky8: Structure of the S. Cerevisiae Phosphatidylcholine Flippase DNF2-LEM3 Complex in the E1-Atp State

All present enzymatic activity of Structure of the S. Cerevisiae Phosphatidylcholine Flippase DNF2-LEM3 Complex in the E1-Atp State:
7.6.2.1;

The binding sites of Magnesium atom in the Structure of the S. Cerevisiae Phosphatidylcholine Flippase DNF2-LEM3 Complex in the E1-Atp State (pdb code 7ky8). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the S. Cerevisiae Phosphatidylcholine Flippase DNF2-LEM3 Complex in the E1-Atp State, PDB code: 7ky8:

Magnesium binding site 1 out of 1 in the Structure of the S. Cerevisiae Phosphatidylcholine Flippase DNF2-LEM3 Complex in the E1-Atp State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the S. Cerevisiae Phosphatidylcholine Flippase DNF2-LEM3 Complex in the E1-Atp State within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1705 b:34.6 occ:1.00 CB A:THR714 2.4 45.8 1.0 OG1 A:THR714 2.6 45.8 1.0 O A:ASP1173 2.8 42.3 1.0 CG2 A:THR714 3.1 45.8 1.0 CA A:THR714 3.8 45.8 1.0 C A:ASP1173 3.8 42.3 1.0 CA A:GLY1174 4.0 49.6 1.0 C A:THR714 4.1 45.8 1.0 N A:GLY715 4.2 40.6 1.0 O3G A:ACP1706 4.2 73.6 1.0 OD1 A:ASN1176 4.4 51.5 1.0 N A:GLY1174 4.4 49.6 1.0 OD2 A:ASP712 4.5 35.9 1.0 OD1 A:ASP1177 4.5 44.6 1.0 OD2 A:ASP1173 4.6 42.3 1.0 O A:THR714 4.7 45.8 1.0 ND2 A:ASN1176 4.8 51.5 1.0 ND2 A:ASN720 4.8 51.0 1.0 N A:THR714 4.9 45.8 1.0 CA A:GLY715 5.0 40.6 1.0

L.Bai, Q.You, B.K.Jain, H.D.Duan, A.Kovach, T.R.Graham, H.Li. Transport Mechanism of P4 Atpase Phosphatidylcholine Flippases. Elife V. 9 2020.
ISSN: ESSN 2050-084X
PubMed: 33320091
DOI: 10.7554/ELIFE.62163