Magnesium in PDB 7l1r: PS3 F1-Atpase Hydrolysis Dwell

All present enzymatic activity of PS3 F1-Atpase Hydrolysis Dwell:
7.1.2.2;

The binding sites of Magnesium atom in the PS3 F1-Atpase Hydrolysis Dwell (pdb code 7l1r). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 6 binding sites of Magnesium where determined in the PS3 F1-Atpase Hydrolysis Dwell, PDB code: 7l1r:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6;

Magnesium binding site 1 out of 6 in the PS3 F1-Atpase Hydrolysis Dwell


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of PS3 F1-Atpase Hydrolysis Dwell within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg601 b:145.2 occ:1.00 O2G A:ATP600 2.5 160.7 1.0 O1B A:ATP600 2.5 160.7 1.0 OG1 A:THR176 2.7 151.8 1.0 CB A:THR176 3.7 151.8 1.0 PB A:ATP600 3.8 160.7 1.0 PG A:ATP600 3.8 160.7 1.0 O3B A:ATP600 4.0 160.7 1.0 OD1 A:ASP261 4.1 147.6 1.0 O1A A:ATP600 4.1 160.7 1.0 CG2 A:THR176 4.5 151.8 1.0 OE1 A:GLN200 4.6 148.3 1.0 O1G A:ATP600 4.7 160.7 1.0 N A:THR176 4.7 151.8 1.0 O2B A:ATP600 4.7 160.7 1.0 OD2 A:ASP261 4.8 147.6 1.0 CA A:THR176 4.8 151.8 1.0 CG A:ASP261 4.8 147.6 1.0 O3G A:ATP600 4.9 160.7 1.0 O3A A:ATP600 4.9 160.7 1.0

Magnesium binding site 2 out of 6 in the PS3 F1-Atpase Hydrolysis Dwell


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of PS3 F1-Atpase Hydrolysis Dwell within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg601 b:145.6 occ:1.00 OG1 B:THR176 2.2 141.8 1.0 O1B B:ATP600 2.7 154.5 1.0 O2G B:ATP600 2.8 154.5 1.0 CB B:THR176 2.9 141.8 1.0 O1A B:ATP600 3.7 154.5 1.0 PB B:ATP600 3.9 154.5 1.0 CG2 B:THR176 3.9 141.8 1.0 O3B B:ATP600 4.0 154.5 1.0 N B:THR176 4.0 141.8 1.0 CA B:THR176 4.0 141.8 1.0 PG B:ATP600 4.0 154.5 1.0 OD1 B:ASP261 4.3 146.4 1.0 OE1 B:GLN200 4.7 151.8 1.0 PA B:ATP600 4.8 154.5 1.0 O3A B:ATP600 4.8 154.5 1.0 O1G B:ATP600 4.9 154.5 1.0 OD2 B:ASP261 4.9 146.4 1.0

Magnesium binding site 3 out of 6 in the PS3 F1-Atpase Hydrolysis Dwell


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of PS3 F1-Atpase Hydrolysis Dwell within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg601 b:129.1 occ:1.00 O2G C:ATP600 2.0 146.6 1.0 O1B C:ATP600 2.4 146.6 1.0 OG1 C:THR176 2.4 134.4 1.0 PG C:ATP600 3.3 146.6 1.0 O3B C:ATP600 3.5 146.6 1.0 PB C:ATP600 3.5 146.6 1.0 CB C:THR176 3.7 134.4 1.0 O1A C:ATP600 4.0 146.6 1.0 O1G C:ATP600 4.1 146.6 1.0 O3G C:ATP600 4.4 146.6 1.0 OD1 C:ASP261 4.4 134.3 1.0 N C:THR176 4.5 134.4 1.0 O3A C:ATP600 4.5 146.6 1.0 OD2 C:ASP261 4.6 134.3 1.0 CA C:THR176 4.6 134.4 1.0 O2B C:ATP600 4.6 146.6 1.0 CG2 C:THR176 4.6 134.4 1.0 PA C:ATP600 4.8 146.6 1.0 CG C:ASP261 4.8 134.3 1.0

Magnesium binding site 4 out of 6 in the PS3 F1-Atpase Hydrolysis Dwell


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of PS3 F1-Atpase Hydrolysis Dwell within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg501 b:134.8 occ:1.00 O1G D:ATP500 2.1 137.9 1.0 OG1 D:THR165 2.5 133.7 1.0 O2B D:ATP500 2.8 137.9 1.0 CB D:THR165 3.2 133.7 1.0 PG D:ATP500 3.6 137.9 1.0 OD1 D:ASP190 3.9 151.3 1.0 CG2 D:THR165 4.0 133.7 1.0 O3B D:ATP500 4.1 137.9 1.0 PB D:ATP500 4.1 137.9 1.0 OD2 D:ASP190 4.1 151.3 1.0 O2G D:ATP500 4.3 137.9 1.0 CA D:THR165 4.3 133.7 1.0 CG D:ASP190 4.4 151.3 1.0 O1A D:ATP500 4.4 137.9 1.0 OD1 D:ASP252 4.4 148.2 1.0 ND2 D:ASN253 4.5 145.8 1.0 N D:THR165 4.5 133.7 1.0 O3G D:ATP500 4.6 137.9 1.0 O3A D:ATP500 4.9 137.9 1.0 NH1 D:ARG191 5.0 142.2 1.0

Magnesium binding site 5 out of 6 in the PS3 F1-Atpase Hydrolysis Dwell


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of PS3 F1-Atpase Hydrolysis Dwell within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg502 b:30.0 occ:1.00 OG1 E:THR165 2.6 157.5 1.0 O3B E:ADP501 3.0 173.1 1.0 CB E:THR165 4.0 157.5 1.0 PB E:ADP501 4.3 173.1 1.0 O1B E:ADP501 4.6 173.1 1.0 N E:THR165 4.6 157.5 1.0 CG2 E:THR165 4.7 157.5 1.0 CA E:THR165 4.7 157.5 1.0

Magnesium binding site 6 out of 6 in the PS3 F1-Atpase Hydrolysis Dwell


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of PS3 F1-Atpase Hydrolysis Dwell within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg501 b:130.9 occ:1.00 O1G F:ATP500 2.1 146.1 1.0 O2B F:ATP500 2.3 146.1 1.0 OG1 F:THR165 2.5 133.2 1.0 O3B F:ATP500 3.1 146.1 1.0 PG F:ATP500 3.2 146.1 1.0 PB F:ATP500 3.3 146.1 1.0 O2A F:ATP500 3.6 146.1 1.0 CB F:THR165 3.7 133.2 1.0 O2G F:ATP500 4.0 146.1 1.0 O3A F:ATP500 4.2 146.1 1.0 NH1 B:ARG365 4.3 145.8 1.0 O3G F:ATP500 4.3 146.1 1.0 PA F:ATP500 4.4 146.1 1.0 CG2 F:THR165 4.5 133.2 1.0 NH1 F:ARG191 4.5 146.2 1.0 O1B F:ATP500 4.5 146.1 1.0 NH2 F:ARG191 4.5 146.2 1.0 N F:THR165 4.6 133.2 1.0 CZ F:ARG191 4.7 146.2 1.0 CA F:THR165 4.8 133.2 1.0 O1A F:ATP500 5.0 146.1 1.0

M.Sobti, H.Ueno, H.Noji, A.G.Stewart. PS3 F1-Atpase Hydrolysis Dwell To Be Published.