Magnesium in PDB 7l1s: PS3 F1-Atpase Pi-Bound Dwell

All present enzymatic activity of PS3 F1-Atpase Pi-Bound Dwell:
7.1.2.2;

The binding sites of Magnesium atom in the PS3 F1-Atpase Pi-Bound Dwell (pdb code 7l1s). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the PS3 F1-Atpase Pi-Bound Dwell, PDB code: 7l1s:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in the PS3 F1-Atpase Pi-Bound Dwell


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of PS3 F1-Atpase Pi-Bound Dwell within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg602 b:145.2 occ:1.00 O1A A:ATP601 2.0 160.7 1.0 O1G A:ATP601 2.3 160.7 1.0 OG1 A:THR176 2.4 151.8 1.0 O3B A:ATP601 2.5 160.7 1.0 CB A:THR176 2.7 151.8 1.0 PG A:ATP601 2.9 160.7 1.0 PA A:ATP601 3.3 160.7 1.0 CG2 A:THR176 3.5 151.8 1.0 PB A:ATP601 3.8 160.7 1.0 O3A A:ATP601 3.8 160.7 1.0 O2G A:ATP601 3.8 160.7 1.0 CA A:THR176 4.0 151.8 1.0 N A:THR176 4.1 151.8 1.0 O3G A:ATP601 4.1 160.7 1.0 O2A A:ATP601 4.1 160.7 1.0 O1B A:ATP601 4.3 160.7 1.0 O5' A:ATP601 4.5 160.7 1.0 O2B A:ATP601 4.9 160.7 1.0

Magnesium binding site 2 out of 5 in the PS3 F1-Atpase Pi-Bound Dwell


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of PS3 F1-Atpase Pi-Bound Dwell within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg601 b:145.6 occ:1.00 OG1 B:THR176 2.3 141.8 1.0 O2G B:ATP600 2.6 154.5 1.0 NE2 B:GLN200 2.6 151.8 1.0 O1G B:ATP600 3.0 154.5 1.0 PG B:ATP600 3.3 154.5 1.0 CB B:THR176 3.3 141.8 1.0 CD B:GLN200 3.8 151.8 1.0 OD1 B:ASP261 3.9 146.4 1.0 O3B B:ATP600 3.9 154.5 1.0 O1B B:ATP600 3.9 154.5 1.0 OE1 B:GLN200 4.1 151.8 1.0 CG2 B:THR176 4.2 141.8 1.0 OD2 B:ASP261 4.3 146.4 1.0 CA B:THR176 4.4 141.8 1.0 N B:THR176 4.4 141.8 1.0 CG B:ASP261 4.4 146.4 1.0 PB B:ATP600 4.5 154.5 1.0 O3G B:ATP600 4.6 154.5 1.0

Magnesium binding site 3 out of 5 in the PS3 F1-Atpase Pi-Bound Dwell


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of PS3 F1-Atpase Pi-Bound Dwell within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg601 b:129.1 occ:1.00 O2G C:ATP600 2.0 146.6 1.0 OG1 C:THR176 2.1 134.4 1.0 PG C:ATP600 2.9 146.6 1.0 O1G C:ATP600 2.9 146.6 1.0 O3B C:ATP600 3.4 146.6 1.0 CB C:THR176 3.5 134.4 1.0 O1B C:ATP600 3.5 146.6 1.0 PB C:ATP600 4.1 146.6 1.0 OD1 C:ASP261 4.2 134.3 1.0 CG2 C:THR176 4.2 134.4 1.0 N C:THR176 4.2 134.4 1.0 O3G C:ATP600 4.3 146.6 1.0 CA C:THR176 4.3 134.4 1.0 CE2 C:PHE318 4.8 125.7 1.0 O1A C:ATP600 4.9 146.6 1.0 CG C:ASP261 4.9 134.3 1.0

Magnesium binding site 4 out of 5 in the PS3 F1-Atpase Pi-Bound Dwell


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of PS3 F1-Atpase Pi-Bound Dwell within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg501 b:134.8 occ:1.00 OG1 D:THR165 2.1 133.7 1.0 O1G D:ATP500 2.1 137.9 1.0 O2B D:ATP500 2.1 137.9 1.0 O3B D:ATP500 2.8 137.9 1.0 PB D:ATP500 3.0 137.9 1.0 PG D:ATP500 3.0 137.9 1.0 NH1 D:ARG191 3.0 142.2 1.0 CB D:THR165 3.3 133.7 1.0 O1A D:ATP500 3.6 137.9 1.0 N D:THR165 3.7 133.7 1.0 NZ D:LYS164 3.8 133.9 1.0 O3A D:ATP500 3.9 137.9 1.0 PA D:ATP500 4.0 137.9 1.0 O3G D:ATP500 4.0 137.9 1.0 O2A D:ATP500 4.0 137.9 1.0 O2G D:ATP500 4.0 137.9 1.0 CA D:THR165 4.0 133.7 1.0 CZ D:ARG191 4.2 142.2 1.0 O1B D:ATP500 4.2 137.9 1.0 CB D:LYS164 4.3 133.9 1.0 CG2 D:THR165 4.4 133.7 1.0 ND2 D:ASN253 4.4 145.8 1.0 C D:LYS164 4.6 133.9 1.0 NH2 D:ARG191 4.7 142.2 1.0 OD1 D:ASN253 4.8 145.8 1.0 CA D:LYS164 4.9 133.9 1.0 N D:LYS164 5.0 133.9 1.0

Magnesium binding site 5 out of 5 in the PS3 F1-Atpase Pi-Bound Dwell


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of PS3 F1-Atpase Pi-Bound Dwell within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg501 b:130.9 occ:1.00 OD2 F:ASP252 2.6 146.8 1.0 OG1 F:THR165 2.6 133.2 1.0 CG F:ASP252 3.6 146.8 1.0 OD1 F:ASP190 3.6 150.8 1.0 O1G F:ATP500 3.8 146.1 1.0 OD1 F:ASP252 3.8 146.8 1.0 CB F:THR165 3.9 133.2 1.0 CG2 F:THR165 4.2 133.2 1.0 O F:ASP252 4.5 146.8 1.0 ND2 F:ASN253 4.6 137.4 1.0 CG F:ASP190 4.6 150.8 1.0 O2B F:ATP500 4.6 146.1 1.0 NH2 F:ARG191 4.9 146.2 1.0 N F:ARG191 4.9 146.2 1.0 CA F:THR165 4.9 133.2 1.0 CA F:ASP190 5.0 150.8 1.0 CB F:ASP252 5.0 146.8 1.0 CG F:GLU194 5.0 156.5 1.0

M.Sobti, H.Ueno, H.Noji, A.G.Stewart. PS3 F1-Atpase Pi-Bound Dwell To Be Published.