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Magnesium in PDB 7l5e: Crystal Structure of Kpt-330 Bound to CRM1 (537-Dltvk-541 to Glceq)

Protein crystallography data

The structure of Crystal Structure of Kpt-330 Bound to CRM1 (537-Dltvk-541 to Glceq), PDB code: 7l5e was solved by J.M.Baumhardt, Y.M.Chook, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.80 / 1.94
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 105.434, 105.434, 305.08, 90, 90, 90
R / Rfree (%) 22.6 / 24.5

Other elements in 7l5e:

The structure of Crystal Structure of Kpt-330 Bound to CRM1 (537-Dltvk-541 to Glceq) also contains other interesting chemical elements:

Fluorine (F) 6 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Kpt-330 Bound to CRM1 (537-Dltvk-541 to Glceq) (pdb code 7l5e). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Kpt-330 Bound to CRM1 (537-Dltvk-541 to Glceq), PDB code: 7l5e:

Magnesium binding site 1 out of 1 in 7l5e

Go back to Magnesium Binding Sites List in 7l5e
Magnesium binding site 1 out of 1 in the Crystal Structure of Kpt-330 Bound to CRM1 (537-Dltvk-541 to Glceq)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Kpt-330 Bound to CRM1 (537-Dltvk-541 to Glceq) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg302

b:18.5
occ:1.00
OG1 A:THR24 2.0 25.7 1.0
O1B A:GNP301 2.0 23.4 1.0
O3G A:GNP301 2.1 21.9 1.0
OG1 A:THR42 2.1 25.8 1.0
CB A:THR42 3.0 27.7 1.0
CB A:THR24 3.1 26.3 1.0
PG A:GNP301 3.3 22.8 1.0
PB A:GNP301 3.3 21.5 1.0
N A:THR42 3.5 28.1 1.0
N3B A:GNP301 3.6 32.0 1.0
CA A:THR42 3.8 29.3 1.0
O1A A:GNP301 3.8 26.8 1.0
O2G A:GNP301 3.8 17.3 1.0
O A:HOH416 3.9 45.0 1.0
N A:THR24 4.1 22.2 1.0
OD2 A:ASP65 4.1 33.1 1.0
CG2 A:THR24 4.1 29.2 1.0
CA A:THR24 4.2 23.9 1.0
OD1 A:ASP65 4.2 28.9 1.0
O2B A:GNP301 4.3 23.6 1.0
CG2 A:THR42 4.3 27.0 1.0
O3A A:GNP301 4.4 20.4 1.0
O A:VAL40 4.4 28.6 1.0
O1G A:GNP301 4.5 22.6 1.0
CG A:ASP65 4.5 30.1 1.0
PA A:GNP301 4.6 23.2 1.0
C A:ALA41 4.6 30.1 1.0
O2A A:GNP301 4.7 26.0 1.0
O A:THR66 4.8 26.4 1.0
O A:HOH477 4.9 45.0 1.0
CA A:ALA41 4.9 31.6 1.0

Reference:

J.S.Walker, Z.A.Hing, B.Harrington, J.Baumhardt, H.G.Ozer, A.Lehman, B.Giacopelli, L.Beaver, K.Williams, J.N.Skinner, C.B.Cempre, Q.Sun, S.Shacham, B.R.Stromberg, M.K.Summers, L.V.Abruzzo, L.Rassenti, T.J.Kipps, S.Parikh, N.E.Kay, K.A.Rogers, J.A.Woyach, V.Coppola, Y.M.Chook, C.Oakes, J.C.Byrd, R.Lapalombella. Recurrent XPO1 Mutations Alter Pathogenesis of Chronic Lymphocytic Leukemia. J Hematol Oncol V. 14 17 2021.
ISSN: ISSN 1756-8722
PubMed: 33451349
DOI: 10.1186/S13045-021-01032-2
Page generated: Wed Oct 2 23:18:22 2024

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