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Magnesium in PDB 7l6s: Crystal Structure of the Atpase and Transducer Domains of Dna Topoisomerase II From Balamuthia Mandrillaris Cdc:V039: Baboon/San Diego/1986

Enzymatic activity of Crystal Structure of the Atpase and Transducer Domains of Dna Topoisomerase II From Balamuthia Mandrillaris Cdc:V039: Baboon/San Diego/1986

All present enzymatic activity of Crystal Structure of the Atpase and Transducer Domains of Dna Topoisomerase II From Balamuthia Mandrillaris Cdc:V039: Baboon/San Diego/1986:
5.6.2.2;

Protein crystallography data

The structure of Crystal Structure of the Atpase and Transducer Domains of Dna Topoisomerase II From Balamuthia Mandrillaris Cdc:V039: Baboon/San Diego/1986, PDB code: 7l6s was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.74 / 1.95
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 87.77, 187.25, 61.69, 90, 90, 90
R / Rfree (%) 16.7 / 19.6

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Atpase and Transducer Domains of Dna Topoisomerase II From Balamuthia Mandrillaris Cdc:V039: Baboon/San Diego/1986 (pdb code 7l6s). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Atpase and Transducer Domains of Dna Topoisomerase II From Balamuthia Mandrillaris Cdc:V039: Baboon/San Diego/1986, PDB code: 7l6s:

Magnesium binding site 1 out of 1 in 7l6s

Go back to Magnesium Binding Sites List in 7l6s
Magnesium binding site 1 out of 1 in the Crystal Structure of the Atpase and Transducer Domains of Dna Topoisomerase II From Balamuthia Mandrillaris Cdc:V039: Baboon/San Diego/1986


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Atpase and Transducer Domains of Dna Topoisomerase II From Balamuthia Mandrillaris Cdc:V039: Baboon/San Diego/1986 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg601

b:25.5
occ:1.00
 OD1 A:ASN184 2.1 23.1 1.0
O3G A:ANP600 2.1 23.1 1.0
O2A A:ANP600 2.1 22.3 1.0
O A:HOH712 2.1 24.6 1.0
O1B A:ANP600 2.2 23.1 1.0
O A:HOH781 2.2 24.2 1.0
CG A:ASN184 3.0 25.1 1.0
PB A:ANP600 3.1 24.5 1.0
PA A:ANP600 3.3 23.0 1.0
O3A A:ANP600 3.4 23.1 1.0
PG A:ANP600 3.4 22.6 1.0
ND2 A:ASN184 3.4 23.5 1.0
N3B A:ANP600 3.6 23.3 1.0
O A:HOH757 4.0 26.1 1.0
O5' A:ANP600 4.0 23.9 1.0
O A:HOH826 4.1 31.9 1.0
OE1 A:GLU180 4.2 27.6 1.0
O2G A:ANP600 4.3 20.3 1.0
CA A:GLY254 4.3 22.5 1.0
O A:GLU180 4.3 24.3 1.0
O1G A:ANP600 4.4 24.3 1.0
CB A:ASN184 4.4 23.7 1.0
O1A A:ANP600 4.4 22.5 1.0
CA A:GLY259 4.5 20.9 1.0
O2B A:ANP600 4.5 28.9 1.0
N A:GLY259 4.7 20.8 1.0
OD2 A:ASP187 4.7 29.7 1.0
CA A:ASN184 4.7 25.3 1.0
N A:ALA260 4.9 22.3 1.0
N A:ASN184 4.9 22.8 1.0

Reference:

J.Abendroth, D.Fox Iii, D.D.Lorimer, P.S.Horanyi, T.E.Edwards. Crystal Structure of the Atpase and Transducer Domains of Dna Topoisomerase II From Balamuthia Mandrillaris Lepto Id: Cdc:V039: Baboon/San Diego/1986 To Be Published.
Page generated: Wed Oct 2 23:18:21 2024

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