Magnesium in PDB 7lza: Activated Form of Vanr From S. Coelicolor

The structure of Activated Form of Vanr From S. Coelicolor, PDB code: 7lza was solved by L.J.Maciunas, P.J.Loll, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.85 / 2.03
Space group	P 65 2 2
Cell size a, b, c (Å), α, β, γ (°)	97.37, 97.37, 118.65, 90, 90, 120
R / Rfree (%)	18.2 / 22.2

The structure of Activated Form of Vanr From S. Coelicolor also contains other interesting chemical elements:

Fluorine

(F)

3 atoms

The binding sites of Magnesium atom in the Activated Form of Vanr From S. Coelicolor (pdb code 7lza). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Activated Form of Vanr From S. Coelicolor, PDB code: 7lza:

Magnesium binding site 1 out of 1 in the Activated Form of Vanr From S. Coelicolor


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Activated Form of Vanr From S. Coelicolor within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg302 b:34.6 occ:1.00 OD2 A:ASP51 2.0 33.5 1.0 F1 A:BEF301 2.0 35.1 1.0 O A:HOH446 2.0 34.9 1.0 O A:ASP53 2.1 34.4 1.0 OD2 A:ASP8 2.1 39.1 1.0 O A:HOH518 2.1 37.2 1.0 CG A:ASP51 3.0 35.7 1.0 CG A:ASP8 3.0 41.9 1.0 BE A:BEF301 3.2 37.5 1.0 C A:ASP53 3.3 33.7 1.0 OD1 A:ASP8 3.3 39.5 1.0 OD1 A:ASP51 3.4 34.2 1.0 OE1 A:GLU7 4.0 39.5 1.0 CA A:ASP53 4.1 36.6 1.0 CB A:ASP53 4.1 35.5 1.0 F3 A:BEF301 4.1 33.6 1.0 CG2 A:ILE54 4.2 33.5 1.0 N A:ASP53 4.2 34.8 1.0 N A:ILE54 4.3 35.1 1.0 F2 A:BEF301 4.3 33.0 1.0 CB A:ASP51 4.3 34.5 1.0 CB A:ASP8 4.3 36.5 1.0 O A:HOH565 4.4 45.5 1.0 N A:ASP8 4.5 34.8 1.0 CA A:ILE54 4.5 33.2 1.0 CG A:ASP53 4.6 44.4 1.0 NZ A:LYS101 4.7 39.0 1.0 CD A:GLU7 4.8 40.9 1.0 OD2 A:ASP53 4.8 49.8 1.0 OE2 A:GLU7 4.9 40.5 1.0 CA A:ASP8 4.9 38.0 1.0

L.J.Maciunas, N.Porter, P.J.Lee, K.Gupta, P.J.Loll. Structures of Full-Length Vanr From S. Coelicolor in Both the Inactive and Activated States Acta Crystallogr.,Sect.D V. D77 2021.
ISSN: ESSN 1399-0047
DOI: 10.1107/S2059798321006288