Magnesium in PDB 7mko: Escherichia Coli Rna Polymerase Elongation Complex

Enzymatic activity of Escherichia Coli Rna Polymerase Elongation Complex

All present enzymatic activity of Escherichia Coli Rna Polymerase Elongation Complex:
2.7.7.6;

Other elements in 7mko:

The structure of Escherichia Coli Rna Polymerase Elongation Complex also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Escherichia Coli Rna Polymerase Elongation Complex (pdb code 7mko). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Escherichia Coli Rna Polymerase Elongation Complex, PDB code: 7mko:

Magnesium binding site 1 out of 1 in 7mko

Go back to Magnesium Binding Sites List in 7mko
Magnesium binding site 1 out of 1 in the Escherichia Coli Rna Polymerase Elongation Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Escherichia Coli Rna Polymerase Elongation Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg2001

b:22.2
occ:1.00
OD1 D:ASP462 2.2 19.5 1.0
O3' R:A20 2.2 28.6 1.0
OD1 D:ASP464 2.2 26.5 1.0
OD2 D:ASP464 2.3 26.5 1.0
CG D:ASP464 2.5 26.5 1.0
CG D:ASP462 3.0 19.5 1.0
OD2 D:ASP462 3.1 19.5 1.0
CB D:ASP460 3.2 21.1 1.0
C3' R:A20 3.6 28.6 1.0
O D:ASP460 3.6 21.1 1.0
O2' R:A20 3.8 28.6 1.0
CA D:ASP460 3.9 21.1 1.0
CB D:ASP464 4.0 26.5 1.0
C D:ASP460 4.0 21.1 1.0
N D:ASP460 4.0 21.1 1.0
CG D:ASP460 4.1 21.1 1.0
C2' R:A20 4.2 28.6 1.0
C4' R:A20 4.2 28.6 1.0
OD2 D:ASP460 4.3 21.1 1.0
CB D:ASP462 4.4 19.5 1.0
C5' D:2TM2004 4.5 46.1 1.0
N D:ASP464 4.5 26.5 1.0
N D:ASP462 4.6 19.5 1.0
CA D:ASP464 4.6 26.5 1.0
O D:ASP462 4.8 19.5 1.0
C4' D:2TM2004 4.8 46.1 1.0
C5' R:A20 4.8 28.6 1.0
C D:ASP462 4.9 19.5 1.0
CA D:ASP462 4.9 19.5 1.0

Reference:

M.Z.Qayyum, K.S.Murakami. Escherichia Coli Rna Polymerase Elongation Complex To Be Published.
Page generated: Mon Jul 12 14:28:30 2021

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