Magnesium in PDB 7mkp: Escherichia Coli Rna Polymerase Core Enzyme

Enzymatic activity of Escherichia Coli Rna Polymerase Core Enzyme

All present enzymatic activity of Escherichia Coli Rna Polymerase Core Enzyme:
2.7.7.6;

Other elements in 7mkp:

The structure of Escherichia Coli Rna Polymerase Core Enzyme also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Escherichia Coli Rna Polymerase Core Enzyme (pdb code 7mkp). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Escherichia Coli Rna Polymerase Core Enzyme, PDB code: 7mkp:

Magnesium binding site 1 out of 1 in 7mkp

Go back to Magnesium Binding Sites List in 7mkp
Magnesium binding site 1 out of 1 in the Escherichia Coli Rna Polymerase Core Enzyme


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Escherichia Coli Rna Polymerase Core Enzyme within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg2001

b:143.9
occ:1.00
OD2 D:ASP464 1.9 130.1 1.0
OD1 D:ASP462 2.2 135.9 1.0
CG D:ASP464 2.2 130.1 1.0
OD1 D:ASP464 2.2 130.1 1.0
OD2 D:ASP462 2.4 135.9 1.0
CG D:ASP462 2.5 135.9 1.0
O D:ASP460 3.4 132.5 1.0
CB D:ASP464 3.5 130.1 1.0
CB D:ASP460 3.5 132.5 1.0
CB D:ASP462 3.8 135.9 1.0
N D:ASP464 3.9 130.1 1.0
N D:ASP462 3.9 135.9 1.0
C D:ASP460 3.9 132.5 1.0
C D:ASP462 4.1 135.9 1.0
CA D:ASP462 4.2 135.9 1.0
CA D:ASP464 4.2 130.1 1.0
O D:ASP462 4.2 135.9 1.0
CA D:ASP460 4.2 132.5 1.0
CG D:ASP460 4.3 132.5 1.0
OD2 D:ASP460 4.4 132.5 1.0
N D:ASP460 4.5 132.5 1.0
N D:GLY463 4.7 132.1 1.0
C D:GLY463 4.8 132.1 1.0
N D:PHE461 4.8 123.9 1.0
C D:PHE461 5.0 123.9 1.0

Reference:

M.Z.Qayyum, K.S.Murakami. Escherichia Coli Rna Polymerase Core Enzyme To Be Published.
Page generated: Mon Jul 12 14:29:47 2021

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