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Magnesium in PDB 7msu: Crystal Structure of An Archaeal Cnnm, Mtcorb, Cbs-Pair Domain in Complex with MG2+-Atp

Protein crystallography data

The structure of Crystal Structure of An Archaeal Cnnm, Mtcorb, Cbs-Pair Domain in Complex with MG2+-Atp, PDB code: 7msu was solved by Y.S.Chen, K.Gehring, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.19 / 2.07
Space group P 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 52.1, 52.1, 112.284, 90, 90, 90
R / Rfree (%) 20.6 / 25.2

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of An Archaeal Cnnm, Mtcorb, Cbs-Pair Domain in Complex with MG2+-Atp (pdb code 7msu). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of An Archaeal Cnnm, Mtcorb, Cbs-Pair Domain in Complex with MG2+-Atp, PDB code: 7msu:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7msu

Go back to Magnesium Binding Sites List in 7msu
Magnesium binding site 1 out of 2 in the Crystal Structure of An Archaeal Cnnm, Mtcorb, Cbs-Pair Domain in Complex with MG2+-Atp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of An Archaeal Cnnm, Mtcorb, Cbs-Pair Domain in Complex with MG2+-Atp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg402

b:29.6
occ:1.00
O A:HOH525 2.0 31.2 1.0
O A:HOH502 2.1 27.0 1.0
O1G A:ATP404 2.1 32.9 1.0
O A:HOH532 2.2 33.8 1.0
O1A A:ATP404 2.3 23.6 1.0
O1B A:ATP404 2.3 30.6 1.0
PB A:ATP404 3.2 29.6 1.0
PG A:ATP404 3.2 28.4 1.0
O3B A:ATP404 3.3 28.9 1.0
PA A:ATP404 3.4 24.8 1.0
O3A A:ATP404 3.5 29.9 1.0
OE1 A:GLU315 3.7 39.8 1.0
H5'1 A:ATP404 3.8 24.8 1.0
O3G A:ATP404 4.2 35.9 1.0
H5'2 A:ATP404 4.2 24.8 1.0
CD A:GLU315 4.3 41.8 1.0
OE2 A:GLU315 4.3 34.2 1.0
C5' A:ATP404 4.3 20.6 1.0
O2G A:ATP404 4.4 31.3 1.0
O5' A:ATP404 4.4 22.6 1.0
O2A A:ATP404 4.5 20.4 1.0
O2B A:ATP404 4.6 28.2 1.0
HB2 A:GLU315 5.0 31.0 1.0

Magnesium binding site 2 out of 2 in 7msu

Go back to Magnesium Binding Sites List in 7msu
Magnesium binding site 2 out of 2 in the Crystal Structure of An Archaeal Cnnm, Mtcorb, Cbs-Pair Domain in Complex with MG2+-Atp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of An Archaeal Cnnm, Mtcorb, Cbs-Pair Domain in Complex with MG2+-Atp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg403

b:31.1
occ:0.50
O A:HOH522 1.9 32.0 1.0
O A:HOH544 2.0 39.4 1.0
O A:HOH520 2.1 32.3 1.0
OE1 A:GLU280 3.8 44.2 1.0
OE1 A:GLU304 4.1 52.3 1.0
OE2 A:GLU304 4.3 35.4 1.0
OE2 A:GLU280 4.4 42.0 1.0
CD A:GLU280 4.5 37.9 1.0
CD A:GLU304 4.6 43.2 1.0
O A:HOH550 4.6 38.9 1.0
HB2 A:ASP303 5.0 41.7 1.0

Reference:

Y.S.Chen, G.Kozlov, B.E.Moeller, A.Rohaim, R.Fakih, B.Roux, J.E.Burke, K.Gehring. Crystal Structure of An Archaeal Corb Magnesium Transporter To Be Published.
Page generated: Thu Oct 3 01:07:55 2024

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