Magnesium in PDB 7mu0: Mtbetta in the Adp Bound State

The structure of Mtbetta in the Adp Bound State, PDB code: 7mu0 was solved by Z.Cui, J.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.06 / 2.90
Space group	P 2 21 21
Cell size a, b, c (Å), α, β, γ (°)	50.06, 106.96, 269.19, 90, 90, 90
R / Rfree (%)	20 / 24.6

The binding sites of Magnesium atom in the Mtbetta in the Adp Bound State (pdb code 7mu0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the Mtbetta in the Adp Bound State, PDB code: 7mu0:
Jump to Magnesium binding site number: 1; 2; 3; 4;

Magnesium binding site 1 out of 4 in the Mtbetta in the Adp Bound State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Mtbetta in the Adp Bound State within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg603 b:45.6 occ:1.00 O2B A:ADP602 2.3 55.8 1.0 OG A:SER45 2.4 51.2 1.0 PB A:ADP602 3.5 61.0 1.0 O3B A:ADP602 3.7 50.3 1.0 CB A:SER45 3.7 50.0 1.0 OE2 A:GLU185 3.9 66.0 1.0 OD1 A:ASP184 4.0 58.5 1.0 OD2 A:ASP184 4.1 60.7 1.0 N A:SER45 4.4 43.4 1.0 CG A:ASP184 4.4 59.2 1.0 O3A A:ADP602 4.5 62.4 1.0 CD A:GLU185 4.6 69.5 1.0 CA A:SER45 4.6 48.2 1.0 O1B A:ADP602 4.7 49.2 1.0 O2A A:ADP602 4.9 59.2 1.0

Magnesium binding site 2 out of 4 in the Mtbetta in the Adp Bound State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Mtbetta in the Adp Bound State within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg604 b:61.0 occ:1.00 O2B A:ADP601 2.1 79.8 1.0 OG1 A:THR361 2.5 73.3 1.0 PB A:ADP601 3.4 81.6 1.0 OE1 A:GLN391 3.6 124.2 1.0 O3B A:ADP601 3.8 68.0 1.0 OD2 A:ASP467 3.8 72.0 1.0 CB A:THR361 3.9 74.3 1.0 OD1 A:ASP467 3.9 94.3 1.0 O2A A:ADP601 4.2 74.4 1.0 CG A:ASP467 4.3 76.2 1.0 O1B A:ADP601 4.4 62.5 1.0 O3A A:ADP601 4.4 78.5 1.0 CD A:GLN391 4.5 127.0 1.0 N A:THR361 4.6 65.5 1.0 NE2 A:GLN391 4.7 122.3 1.0 CG2 A:THR361 4.7 67.1 1.0 CA A:THR361 4.8 75.2 1.0 PA A:ADP601 4.9 83.2 1.0

Magnesium binding site 3 out of 4 in the Mtbetta in the Adp Bound State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Mtbetta in the Adp Bound State within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg603 b:50.9 occ:1.00 OG1 B:THR361 2.4 77.8 1.0 O1B B:ADP602 2.5 77.8 1.0 O3B B:ADP602 3.3 73.6 1.0 PB B:ADP602 3.4 60.2 1.0 CB B:THR361 3.6 64.3 1.0 OE1 B:GLN391 3.8 103.3 1.0 O3A B:ADP602 4.0 85.4 1.0 OD2 B:ASP467 4.2 86.0 1.0 O1A B:ADP602 4.3 84.0 1.0 N B:THR361 4.3 66.5 1.0 CD B:GLN391 4.4 112.5 1.0 NE2 B:GLN391 4.4 96.9 1.0 OD1 B:ASP467 4.5 80.5 1.0 CA B:THR361 4.6 67.6 1.0 CG2 B:THR361 4.6 65.7 1.0 PA B:ADP602 4.6 59.1 1.0 O2B B:ADP602 4.8 63.1 1.0 CG B:ASP467 4.8 81.7 1.0 O2A B:ADP602 4.9 59.6 1.0

Magnesium binding site 4 out of 4 in the Mtbetta in the Adp Bound State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Mtbetta in the Adp Bound State within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg604 b:80.7 occ:1.00 O1B B:ADP601 2.5 104.3 1.0 OG B:SER45 2.6 83.9 1.0 O2B B:ADP601 3.2 98.8 1.0 PB B:ADP601 3.3 113.1 1.0 CB B:SER45 3.8 79.3 1.0 O1A B:ADP601 4.1 101.5 1.0 OD1 B:ASP184 4.2 74.1 1.0 O3A B:ADP601 4.4 123.2 1.0 OD2 B:ASP184 4.4 76.0 1.0 O3B B:ADP601 4.5 94.8 1.0 N B:SER45 4.6 82.3 1.0 CG B:ASP184 4.8 80.5 1.0 PA B:ADP601 4.8 107.1 1.0 CA B:SER45 4.8 77.1 1.0

Z.Cui, X.Li, J.Shin, H.Gamper, Y.M.Hou, J.C.Sacchettini, J.Zhang. Interplay Between An Atp-Binding Cassette F Protein and the Ribosome From Mycobacterium Tuberculosis. Nat Commun V. 13 432 2022.
ISSN: ESSN 2041-1723
PubMed: 35064151
DOI: 10.1038/S41467-022-28078-1