Magnesium in PDB 7n6i: Atp-Bound Tnsc-Tniq Complex From Shcast System

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Atp-Bound Tnsc-Tniq Complex From Shcast System (pdb code 7n6i). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 7 binding sites of Magnesium where determined in the Atp-Bound Tnsc-Tniq Complex From Shcast System, PDB code: 7n6i:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7;

Magnesium binding site 1 out of 7 in 7n6i

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Magnesium binding site 1 out of 7 in the Atp-Bound Tnsc-Tniq Complex From Shcast System


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Atp-Bound Tnsc-Tniq Complex From Shcast System within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg301

b:30.0
occ:1.00
 O1B D:ATP300 2.3 41.0 1.0
OG1 D:THR67 2.5 41.0 1.0
O3B D:ATP300 3.2 41.0 1.0
PB D:ATP300 3.3 41.0 1.0
O2G D:ATP300 3.4 41.0 1.0
O1G D:ATP300 3.4 41.0 1.0
CB D:THR67 3.5 41.0 1.0
PG D:ATP300 3.6 41.0 1.0
OE2 C:GLU162 4.1 41.0 1.0
NH2 C:ARG189 4.2 41.0 1.0
CG2 D:THR67 4.3 41.0 1.0
O2B D:ATP300 4.4 41.0 1.0
O2A D:ATP300 4.4 41.0 1.0
O3A D:ATP300 4.4 41.0 1.0
OE2 D:GLU145 4.5 41.0 1.0
OE1 C:GLU162 4.6 41.0 1.0
CA D:THR67 4.7 41.0 1.0
OD1 D:ASP144 4.8 41.0 1.0
CD C:GLU162 4.8 41.0 1.0
N D:THR67 4.8 41.0 1.0
CD D:GLU145 4.8 41.0 1.0
NE2 C:GLN185 4.9 41.0 1.0
OD2 D:ASP144 4.9 41.0 1.0
CG D:GLU145 5.0 41.0 1.0

Magnesium binding site 2 out of 7 in 7n6i

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Magnesium binding site 2 out of 7 in the Atp-Bound Tnsc-Tniq Complex From Shcast System


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Atp-Bound Tnsc-Tniq Complex From Shcast System within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg301

b:30.0
occ:1.00
 O3B E:ATP300 2.2 41.0 1.0
O1B E:ATP300 2.3 41.0 1.0
O3G E:ATP300 2.4 41.0 1.0
OG1 E:THR67 2.4 41.0 1.0
PB E:ATP300 2.6 41.0 1.0
PG E:ATP300 2.9 41.0 1.0
O2B E:ATP300 3.4 41.0 1.0
CB E:THR67 3.6 41.0 1.0
O1G E:ATP300 3.6 41.0 1.0
OE2 E:GLU145 4.0 41.0 1.0
O3A E:ATP300 4.0 41.0 1.0
O2G E:ATP300 4.1 41.0 1.0
OD2 E:ASP144 4.4 41.0 1.0
N E:THR67 4.4 41.0 1.0
NH2 D:ARG189 4.4 41.0 1.0
CA E:THR67 4.6 41.0 1.0
OD1 E:ASP144 4.6 41.0 1.0
NZ E:LYS66 4.6 41.0 1.0
CG2 E:THR67 4.6 41.0 1.0
NE2 D:GLN185 4.6 41.0 1.0
CG E:GLU145 4.8 41.0 1.0
CD E:GLU145 4.8 41.0 1.0
O2A E:ATP300 4.8 41.0 1.0
CG E:ASP144 5.0 41.0 1.0

Magnesium binding site 3 out of 7 in 7n6i

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Magnesium binding site 3 out of 7 in the Atp-Bound Tnsc-Tniq Complex From Shcast System


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Atp-Bound Tnsc-Tniq Complex From Shcast System within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Mg301

b:30.0
occ:1.00
 O3B F:ATP300 2.2 41.0 1.0
OG1 F:THR67 2.3 41.0 1.0
O3G F:ATP300 2.6 41.0 1.0
PG F:ATP300 2.8 41.0 1.0
O1G F:ATP300 2.9 41.0 1.0
OE2 F:GLU145 3.4 41.0 1.0
O3A F:ATP300 3.4 41.0 1.0
CB F:THR67 3.4 41.0 1.0
PB F:ATP300 3.5 41.0 1.0
O1B F:ATP300 4.1 41.0 1.0
O2G F:ATP300 4.2 41.0 1.0
N F:THR67 4.3 41.0 1.0
CD F:GLU145 4.3 41.0 1.0
CA F:THR67 4.4 41.0 1.0
CG2 F:THR67 4.4 41.0 1.0
O2B F:ATP300 4.6 41.0 1.0
CG F:GLU145 4.6 41.0 1.0
NZ F:LYS66 4.7 41.0 1.0
PA F:ATP300 4.8 41.0 1.0
NE2 E:GLN185 4.8 41.0 1.0
NH2 E:ARG189 4.9 41.0 1.0
O2A F:ATP300 4.9 41.0 1.0
OE2 E:GLU162 5.0 41.0 1.0
OD2 F:ASP144 5.0 41.0 1.0

Magnesium binding site 4 out of 7 in 7n6i

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Magnesium binding site 4 out of 7 in the Atp-Bound Tnsc-Tniq Complex From Shcast System


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Atp-Bound Tnsc-Tniq Complex From Shcast System within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Mg301

b:30.0
occ:1.00
 OG1 G:THR67 2.2 41.0 1.0
O3B G:ATP300 2.2 41.0 1.0
O3A G:ATP300 3.1 41.0 1.0
PG G:ATP300 3.1 41.0 1.0
O3G G:ATP300 3.1 41.0 1.0
PB G:ATP300 3.2 41.0 1.0
CB G:THR67 3.3 41.0 1.0
O1G G:ATP300 3.4 41.0 1.0
O1B G:ATP300 3.8 41.0 1.0
N G:THR67 4.2 41.0 1.0
CA G:THR67 4.3 41.0 1.0
CG2 G:THR67 4.3 41.0 1.0
OD2 G:ASP144 4.4 41.0 1.0
O2G G:ATP300 4.4 41.0 1.0
O2B G:ATP300 4.4 41.0 1.0
PA G:ATP300 4.5 41.0 1.0
O2A G:ATP300 4.7 41.0 1.0
OD1 G:ASP144 4.7 41.0 1.0
NZ G:LYS66 4.8 41.0 1.0
NH2 F:ARG189 4.9 41.0 1.0
OE2 F:GLU162 4.9 41.0 1.0
CG G:ASP144 4.9 41.0 1.0
NE2 F:GLN185 4.9 41.0 1.0
CD G:GLU145 5.0 41.0 1.0

Magnesium binding site 5 out of 7 in 7n6i

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Magnesium binding site 5 out of 7 in the Atp-Bound Tnsc-Tniq Complex From Shcast System


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Atp-Bound Tnsc-Tniq Complex From Shcast System within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Mg301

b:30.0
occ:1.00
 O1G H:ATP300 2.2 41.0 1.0
O2B H:ATP300 2.2 41.0 1.0
OG1 H:THR67 2.2 41.0 1.0
PG H:ATP300 3.2 41.0 1.0
O3B H:ATP300 3.2 41.0 1.0
PB H:ATP300 3.3 41.0 1.0
O2A H:ATP300 3.5 41.0 1.0
CB H:THR67 3.5 41.0 1.0
O3G H:ATP300 3.7 41.0 1.0
OD2 H:ASP144 4.2 41.0 1.0
O3A H:ATP300 4.3 41.0 1.0
CG2 H:THR67 4.3 41.0 1.0
O1B H:ATP300 4.4 41.0 1.0
OE2 G:GLU162 4.4 41.0 1.0
PA H:ATP300 4.5 41.0 1.0
O2G H:ATP300 4.6 41.0 1.0
OE2 H:GLU145 4.6 41.0 1.0
CA H:THR67 4.6 41.0 1.0
NH2 G:ARG189 4.7 41.0 1.0
N H:THR67 4.7 41.0 1.0
OD1 H:ASP144 5.0 41.0 1.0

Magnesium binding site 6 out of 7 in 7n6i

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Magnesium binding site 6 out of 7 in the Atp-Bound Tnsc-Tniq Complex From Shcast System


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Atp-Bound Tnsc-Tniq Complex From Shcast System within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Mg301

b:30.0
occ:1.00
 OG1 I:THR67 1.9 41.0 1.0
O2B I:ATP300 2.2 41.0 1.0
CB I:THR67 2.7 41.0 1.0
O1G I:ATP300 3.0 41.0 1.0
CG2 I:THR67 3.3 41.0 1.0
OE2 H:GLU162 3.6 41.0 1.0
PB I:ATP300 3.7 41.0 1.0
O2G I:ATP300 3.8 41.0 1.0
OD2 I:ASP144 3.8 41.0 1.0
PG I:ATP300 3.9 41.0 1.0
CA I:THR67 4.0 41.0 1.0
O3B I:ATP300 4.3 41.0 1.0
CD H:GLU162 4.4 41.0 1.0
N I:THR67 4.4 41.0 1.0
OE1 H:GLU162 4.5 41.0 1.0
O3A I:ATP300 4.5 41.0 1.0
OE2 I:GLU145 4.6 41.0 1.0
O2A I:ATP300 4.6 41.0 1.0
NH2 H:ARG189 4.7 41.0 1.0
O1B I:ATP300 4.8 41.0 1.0
CG I:ASP144 4.8 41.0 1.0

Magnesium binding site 7 out of 7 in 7n6i

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Magnesium binding site 7 out of 7 in the Atp-Bound Tnsc-Tniq Complex From Shcast System


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Atp-Bound Tnsc-Tniq Complex From Shcast System within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Mg301

b:30.0
occ:1.00
 OG1 J:THR67 1.8 41.0 1.0
O1G J:ATP300 1.9 41.0 1.0
O3B J:ATP300 2.6 41.0 1.0
PG J:ATP300 2.8 41.0 1.0
CB J:THR67 2.9 41.0 1.0
O1A J:ATP300 3.0 41.0 1.0
CG2 J:THR67 3.8 41.0 1.0
O3G J:ATP300 3.8 41.0 1.0
PB J:ATP300 3.8 41.0 1.0
O2G J:ATP300 3.9 41.0 1.0
PA J:ATP300 3.9 41.0 1.0
O1B J:ATP300 4.0 41.0 1.0
CA J:THR67 4.1 41.0 1.0
OD2 J:ASP144 4.1 41.0 1.0
O3A J:ATP300 4.1 41.0 1.0
OE1 J:GLU145 4.2 41.0 1.0
N J:THR67 4.2 41.0 1.0
OE2 I:GLU162 4.3 41.0 1.0
O2A J:ATP300 4.4 41.0 1.0
OD1 J:ASP144 4.5 41.0 1.0
NH2 I:ARG189 4.7 41.0 1.0
CG J:ASP144 4.7 41.0 1.0
CD J:GLU145 4.9 41.0 1.0
OE1 I:GLU162 4.9 41.0 1.0
CD I:GLU162 5.0 41.0 1.0

Reference:

J.Park, A.Tsai, E.Mehrotra, M.T.Petassi, S.C.Hsieh, A.Ke, J.E.Peters, E.H.Kellogg. Structural Basis For Target-Site Selection in Rna-Guided Dna Transposition Systems Science 2021.
ISSN: ESSN 1095-9203
DOI: 10.1126/SCIENCE.ABI8976
Page generated: Sat Aug 21 16:46:36 2021

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