Magnesium in PDB 7ny1: Structure of the Fungal Plasma Membrane Proton Pump PMA1 in Its Auto- Inhibited State - Hexameric Assembly
Enzymatic activity of Structure of the Fungal Plasma Membrane Proton Pump PMA1 in Its Auto- Inhibited State - Hexameric Assembly
All present enzymatic activity of Structure of the Fungal Plasma Membrane Proton Pump PMA1 in Its Auto- Inhibited State - Hexameric Assembly:
7.1.2.1;
Other elements in 7ny1:
The structure of Structure of the Fungal Plasma Membrane Proton Pump PMA1 in Its Auto- Inhibited State - Hexameric Assembly also contains other interesting chemical elements:
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Structure of the Fungal Plasma Membrane Proton Pump PMA1 in Its Auto- Inhibited State - Hexameric Assembly
(pdb code 7ny1). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 6 binding sites of Magnesium where determined in the
Structure of the Fungal Plasma Membrane Proton Pump PMA1 in Its Auto- Inhibited State - Hexameric Assembly, PDB code: 7ny1:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
Magnesium binding site 1 out
of 6 in 7ny1
Go back to
Magnesium Binding Sites List in 7ny1
Magnesium binding site 1 out
of 6 in the Structure of the Fungal Plasma Membrane Proton Pump PMA1 in Its Auto- Inhibited State - Hexameric Assembly
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Structure of the Fungal Plasma Membrane Proton Pump PMA1 in Its Auto- Inhibited State - Hexameric Assembly within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg1002
b:93.5
occ:1.00
|
PB
|
A:ADP1001
|
2.4
|
109.5
|
1.0
|
O3B
|
A:ADP1001
|
2.5
|
109.5
|
1.0
|
O1B
|
A:ADP1001
|
2.6
|
109.5
|
1.0
|
O2B
|
A:ADP1001
|
2.7
|
109.5
|
1.0
|
CB
|
A:THR380
|
3.7
|
74.7
|
1.0
|
CB
|
A:ASP378
|
4.2
|
65.3
|
1.0
|
O3A
|
A:ADP1001
|
4.2
|
109.5
|
1.0
|
O
|
A:THR380
|
4.2
|
74.7
|
1.0
|
OD1
|
A:ASP378
|
4.3
|
65.3
|
1.0
|
CG2
|
A:THR380
|
4.3
|
74.7
|
1.0
|
CG
|
A:ASP378
|
4.4
|
65.3
|
1.0
|
OG1
|
A:THR380
|
4.5
|
74.7
|
1.0
|
N
|
A:THR380
|
4.5
|
74.7
|
1.0
|
CA
|
A:THR380
|
4.6
|
74.7
|
1.0
|
PA
|
A:ADP1001
|
4.8
|
109.5
|
1.0
|
O1A
|
A:ADP1001
|
4.8
|
109.5
|
1.0
|
C
|
A:THR380
|
4.8
|
74.7
|
1.0
|
|
Magnesium binding site 2 out
of 6 in 7ny1
Go back to
Magnesium Binding Sites List in 7ny1
Magnesium binding site 2 out
of 6 in the Structure of the Fungal Plasma Membrane Proton Pump PMA1 in Its Auto- Inhibited State - Hexameric Assembly
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Structure of the Fungal Plasma Membrane Proton Pump PMA1 in Its Auto- Inhibited State - Hexameric Assembly within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg1002
b:93.5
occ:1.00
|
PB
|
B:ADP1001
|
2.4
|
109.5
|
1.0
|
O3B
|
B:ADP1001
|
2.5
|
109.5
|
1.0
|
O1B
|
B:ADP1001
|
2.6
|
109.5
|
1.0
|
O2B
|
B:ADP1001
|
2.7
|
109.5
|
1.0
|
CB
|
B:THR380
|
3.7
|
74.7
|
1.0
|
CB
|
B:ASP378
|
4.2
|
65.3
|
1.0
|
O3A
|
B:ADP1001
|
4.2
|
109.5
|
1.0
|
O
|
B:THR380
|
4.2
|
74.7
|
1.0
|
OD1
|
B:ASP378
|
4.3
|
65.3
|
1.0
|
CG2
|
B:THR380
|
4.4
|
74.7
|
1.0
|
CG
|
B:ASP378
|
4.4
|
65.3
|
1.0
|
OG1
|
B:THR380
|
4.4
|
74.7
|
1.0
|
N
|
B:THR380
|
4.5
|
74.7
|
1.0
|
CA
|
B:THR380
|
4.6
|
74.7
|
1.0
|
PA
|
B:ADP1001
|
4.8
|
109.5
|
1.0
|
O1A
|
B:ADP1001
|
4.8
|
109.5
|
1.0
|
C
|
B:THR380
|
4.8
|
74.7
|
1.0
|
|
Magnesium binding site 3 out
of 6 in 7ny1
Go back to
Magnesium Binding Sites List in 7ny1
Magnesium binding site 3 out
of 6 in the Structure of the Fungal Plasma Membrane Proton Pump PMA1 in Its Auto- Inhibited State - Hexameric Assembly
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Structure of the Fungal Plasma Membrane Proton Pump PMA1 in Its Auto- Inhibited State - Hexameric Assembly within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg1002
b:93.5
occ:1.00
|
PB
|
C:ADP1001
|
2.4
|
109.5
|
1.0
|
O3B
|
C:ADP1001
|
2.5
|
109.5
|
1.0
|
O1B
|
C:ADP1001
|
2.6
|
109.5
|
1.0
|
O2B
|
C:ADP1001
|
2.7
|
109.5
|
1.0
|
CB
|
C:THR380
|
3.7
|
74.7
|
1.0
|
CB
|
C:ASP378
|
4.2
|
65.3
|
1.0
|
O3A
|
C:ADP1001
|
4.2
|
109.5
|
1.0
|
O
|
C:THR380
|
4.2
|
74.7
|
1.0
|
OD1
|
C:ASP378
|
4.3
|
65.3
|
1.0
|
CG2
|
C:THR380
|
4.4
|
74.7
|
1.0
|
CG
|
C:ASP378
|
4.4
|
65.3
|
1.0
|
OG1
|
C:THR380
|
4.5
|
74.7
|
1.0
|
N
|
C:THR380
|
4.5
|
74.7
|
1.0
|
CA
|
C:THR380
|
4.6
|
74.7
|
1.0
|
PA
|
C:ADP1001
|
4.8
|
109.5
|
1.0
|
O1A
|
C:ADP1001
|
4.8
|
109.5
|
1.0
|
C
|
C:THR380
|
4.8
|
74.7
|
1.0
|
|
Magnesium binding site 4 out
of 6 in 7ny1
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Magnesium Binding Sites List in 7ny1
Magnesium binding site 4 out
of 6 in the Structure of the Fungal Plasma Membrane Proton Pump PMA1 in Its Auto- Inhibited State - Hexameric Assembly
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Structure of the Fungal Plasma Membrane Proton Pump PMA1 in Its Auto- Inhibited State - Hexameric Assembly within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg1002
b:93.5
occ:1.00
|
PB
|
D:ADP1001
|
2.4
|
109.5
|
1.0
|
O3B
|
D:ADP1001
|
2.5
|
109.5
|
1.0
|
O1B
|
D:ADP1001
|
2.6
|
109.5
|
1.0
|
O2B
|
D:ADP1001
|
2.7
|
109.5
|
1.0
|
CB
|
D:THR380
|
3.7
|
74.7
|
1.0
|
CB
|
D:ASP378
|
4.2
|
65.3
|
1.0
|
O3A
|
D:ADP1001
|
4.2
|
109.5
|
1.0
|
O
|
D:THR380
|
4.2
|
74.7
|
1.0
|
OD1
|
D:ASP378
|
4.3
|
65.3
|
1.0
|
CG2
|
D:THR380
|
4.3
|
74.7
|
1.0
|
CG
|
D:ASP378
|
4.4
|
65.3
|
1.0
|
OG1
|
D:THR380
|
4.5
|
74.7
|
1.0
|
N
|
D:THR380
|
4.5
|
74.7
|
1.0
|
CA
|
D:THR380
|
4.6
|
74.7
|
1.0
|
PA
|
D:ADP1001
|
4.8
|
109.5
|
1.0
|
O1A
|
D:ADP1001
|
4.8
|
109.5
|
1.0
|
C
|
D:THR380
|
4.8
|
74.7
|
1.0
|
|
Magnesium binding site 5 out
of 6 in 7ny1
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Magnesium Binding Sites List in 7ny1
Magnesium binding site 5 out
of 6 in the Structure of the Fungal Plasma Membrane Proton Pump PMA1 in Its Auto- Inhibited State - Hexameric Assembly
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Structure of the Fungal Plasma Membrane Proton Pump PMA1 in Its Auto- Inhibited State - Hexameric Assembly within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg1002
b:93.5
occ:1.00
|
PB
|
E:ADP1001
|
2.4
|
109.5
|
1.0
|
O3B
|
E:ADP1001
|
2.5
|
109.5
|
1.0
|
O1B
|
E:ADP1001
|
2.6
|
109.5
|
1.0
|
O2B
|
E:ADP1001
|
2.7
|
109.5
|
1.0
|
CB
|
E:THR380
|
3.7
|
74.7
|
1.0
|
CB
|
E:ASP378
|
4.2
|
65.3
|
1.0
|
O3A
|
E:ADP1001
|
4.2
|
109.5
|
1.0
|
O
|
E:THR380
|
4.2
|
74.7
|
1.0
|
OD1
|
E:ASP378
|
4.3
|
65.3
|
1.0
|
CG2
|
E:THR380
|
4.4
|
74.7
|
1.0
|
CG
|
E:ASP378
|
4.4
|
65.3
|
1.0
|
OG1
|
E:THR380
|
4.4
|
74.7
|
1.0
|
N
|
E:THR380
|
4.5
|
74.7
|
1.0
|
CA
|
E:THR380
|
4.6
|
74.7
|
1.0
|
PA
|
E:ADP1001
|
4.8
|
109.5
|
1.0
|
O1A
|
E:ADP1001
|
4.8
|
109.5
|
1.0
|
C
|
E:THR380
|
4.8
|
74.7
|
1.0
|
|
Magnesium binding site 6 out
of 6 in 7ny1
Go back to
Magnesium Binding Sites List in 7ny1
Magnesium binding site 6 out
of 6 in the Structure of the Fungal Plasma Membrane Proton Pump PMA1 in Its Auto- Inhibited State - Hexameric Assembly
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Structure of the Fungal Plasma Membrane Proton Pump PMA1 in Its Auto- Inhibited State - Hexameric Assembly within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Mg1002
b:93.5
occ:1.00
|
PB
|
F:ADP1001
|
2.4
|
109.5
|
1.0
|
O3B
|
F:ADP1001
|
2.5
|
109.5
|
1.0
|
O1B
|
F:ADP1001
|
2.6
|
109.5
|
1.0
|
O2B
|
F:ADP1001
|
2.7
|
109.5
|
1.0
|
CB
|
F:THR380
|
3.7
|
74.7
|
1.0
|
CB
|
F:ASP378
|
4.2
|
65.3
|
1.0
|
O3A
|
F:ADP1001
|
4.2
|
109.5
|
1.0
|
O
|
F:THR380
|
4.2
|
74.7
|
1.0
|
OD1
|
F:ASP378
|
4.3
|
65.3
|
1.0
|
CG2
|
F:THR380
|
4.4
|
74.7
|
1.0
|
CG
|
F:ASP378
|
4.4
|
65.3
|
1.0
|
OG1
|
F:THR380
|
4.5
|
74.7
|
1.0
|
N
|
F:THR380
|
4.5
|
74.7
|
1.0
|
CA
|
F:THR380
|
4.6
|
74.7
|
1.0
|
PA
|
F:ADP1001
|
4.8
|
109.5
|
1.0
|
O1A
|
F:ADP1001
|
4.8
|
109.5
|
1.0
|
C
|
F:THR380
|
4.8
|
74.7
|
1.0
|
|
Reference:
S.Heit,
M.M.G.Geurts,
B.J.Murphy,
R.Corey,
D.J.Mills,
W.Kuehlbrandt,
M.Bublitz.
Structure of the Fungal Plasma Membrane Proton Pump PMA1 in Its Auto-Inhibited State - Hexameric Assembly To Be Published.
Page generated: Thu Oct 3 02:21:09 2024
|