Magnesium in PDB 7oci: Cryo-Em Structure of Yeast OST6P Containing Oligosaccharyltransferase Complex

All present enzymatic activity of Cryo-Em Structure of Yeast OST6P Containing Oligosaccharyltransferase Complex:
2.4.99.18;

The binding sites of Magnesium atom in the Cryo-Em Structure of Yeast OST6P Containing Oligosaccharyltransferase Complex (pdb code 7oci). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of Yeast OST6P Containing Oligosaccharyltransferase Complex, PDB code: 7oci:

Magnesium binding site 1 out of 1 in the Cryo-Em Structure of Yeast OST6P Containing Oligosaccharyltransferase Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Yeast OST6P Containing Oligosaccharyltransferase Complex within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg901 b:40.0 occ:1.00 O59 F:V8K903 2.8 20.0 1.0 OD2 F:ASP47 2.9 31.6 1.0 OD2 F:ASP166 3.2 32.0 1.0 OD1 F:ASP166 3.4 32.0 1.0 NH2 F:ARG404 3.5 64.0 1.0 CG F:ASP166 3.7 32.0 1.0 P57 F:V8K903 4.1 20.0 1.0 CG F:ASP47 4.2 31.6 1.0 OE1 F:GLU168 4.2 39.1 1.0 OE2 F:GLU168 4.3 39.1 1.0 O60 F:V8K903 4.6 20.0 1.0 CD F:GLU168 4.7 39.1 1.0 CZ F:ARG404 4.9 64.0 1.0 O58 F:V8K903 4.9 20.0 1.0 CB F:ASP47 4.9 31.6 1.0

J.D.Neuhaus, R.Wild, J.Eyring, R.N.Irobalieva, J.Kowal, C.W.Lin, K.P.Locher, M.Aebi. Functional Analysis of OST3P and OST6P Containing Yeast Oligosaccharyltransferases. Glycobiology V. 31 1604 2021.
ISSN: ESSN 1460-2423
PubMed: 34974622
DOI: 10.1093/GLYCOB/CWAB084