Magnesium in PDB 7oea: Lassa Virus L Protein Bound to 3' Promoter Rna (Well-Resolved Polymerase Core) [3END-Core]

Enzymatic activity of Lassa Virus L Protein Bound to 3' Promoter Rna (Well-Resolved Polymerase Core) [3END-Core]

All present enzymatic activity of Lassa Virus L Protein Bound to 3' Promoter Rna (Well-Resolved Polymerase Core) [3END-Core]:
2.7.7.48;

Other elements in 7oea:

The structure of Lassa Virus L Protein Bound to 3' Promoter Rna (Well-Resolved Polymerase Core) [3END-Core] also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Lassa Virus L Protein Bound to 3' Promoter Rna (Well-Resolved Polymerase Core) [3END-Core] (pdb code 7oea). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Lassa Virus L Protein Bound to 3' Promoter Rna (Well-Resolved Polymerase Core) [3END-Core], PDB code: 7oea:

Magnesium binding site 1 out of 1 in 7oea

Go back to Magnesium Binding Sites List in 7oea
Magnesium binding site 1 out of 1 in the Lassa Virus L Protein Bound to 3' Promoter Rna (Well-Resolved Polymerase Core) [3END-Core]


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Lassa Virus L Protein Bound to 3' Promoter Rna (Well-Resolved Polymerase Core) [3END-Core] within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg2302

b:26.0
occ:1.00
OD1 L:ASP1332 2.1 28.9 1.0
O L:HOH2404 2.1 35.5 1.0
O L:MET1189 2.8 28.4 1.0
CG L:ASP1332 3.1 28.9 1.0
OE1 L:GLU1382 3.2 23.9 1.0
C L:MET1189 3.2 28.4 1.0
OD2 L:ASP1332 3.5 28.9 1.0
N L:MET1189 3.7 28.4 1.0
OD2 L:ASP1190 3.7 30.3 1.0
N L:ASP1190 3.8 30.3 1.0
CG L:ASP1190 3.8 30.3 1.0
O L:GLN1333 3.8 25.4 1.0
OD1 L:ASP1190 3.8 30.3 1.0
CA L:MET1189 4.0 28.4 1.0
CD L:GLU1382 4.1 23.9 1.0
C L:SER1188 4.2 23.7 1.0
N L:GLN1333 4.2 25.4 1.0
OE2 L:GLU1382 4.2 23.9 1.0
CA L:ASP1190 4.3 30.3 1.0
O L:GLU1382 4.3 23.9 1.0
CB L:ASP1332 4.4 28.9 1.0
CB L:SER1188 4.5 23.7 1.0
CB L:ASP1190 4.6 30.3 1.0
CA L:ASP1332 4.7 28.9 1.0
CA L:SER1188 4.7 23.7 1.0
C L:GLN1333 4.7 25.4 1.0
O L:SER1188 4.8 23.7 1.0
C L:ASP1332 5.0 28.9 1.0
CA L:PHE1383 5.0 23.6 1.0
C L:GLU1382 5.0 23.9 1.0

Reference:

T.Kouba, D.Vogel, S.Thorkelsson, E.Quemin, H.William, M.Milewski, C.Busch, S.Gunther, K.Grunewald, M.Rosenthal, S.Cusack. Conformational Changes in Lassa Virus L Protein Associated with Promoter Binding and Rna Synthesis Activity To Be Published.
Page generated: Fri Dec 17 10:51:24 2021

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