Atomistry » Magnesium » PDB 7oiw-7opq » 7opc
Atomistry »
  Magnesium »
    PDB 7oiw-7opq »
      7opc »

Magnesium in PDB 7opc: Pol II-Csb-CRL4CSA-Uvssa-SPT6-Paf (Structure 4)

Enzymatic activity of Pol II-Csb-CRL4CSA-Uvssa-SPT6-Paf (Structure 4)

All present enzymatic activity of Pol II-Csb-CRL4CSA-Uvssa-SPT6-Paf (Structure 4):
2.3.2.27; 2.3.2.32; 2.7.7.6;

Other elements in 7opc:

The structure of Pol II-Csb-CRL4CSA-Uvssa-SPT6-Paf (Structure 4) also contains other interesting chemical elements:

Zinc (Zn) 8 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Pol II-Csb-CRL4CSA-Uvssa-SPT6-Paf (Structure 4) (pdb code 7opc). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Pol II-Csb-CRL4CSA-Uvssa-SPT6-Paf (Structure 4), PDB code: 7opc:

Magnesium binding site 1 out of 1 in 7opc

Go back to Magnesium Binding Sites List in 7opc
Magnesium binding site 1 out of 1 in the Pol II-Csb-CRL4CSA-Uvssa-SPT6-Paf (Structure 4)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Pol II-Csb-CRL4CSA-Uvssa-SPT6-Paf (Structure 4) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg2003

b:38.2
occ:1.00
OD1 A:ASP495 1.9 12.6 1.0
OD1 A:ASP499 1.9 22.4 1.0
OD1 A:ASP497 2.1 15.3 1.0
OD2 A:ASP499 2.2 22.4 1.0
O3' P:A45 2.3 27.7 1.0
CG A:ASP499 2.3 22.4 1.0
CG A:ASP495 3.0 12.6 1.0
CG A:ASP497 3.2 15.3 1.0
C3' P:A45 3.4 27.7 1.0
O2' P:A45 3.5 27.7 1.0
OD2 A:ASP497 3.5 15.3 1.0
OD2 A:ASP495 3.5 12.6 1.0
O A:ASP495 3.7 12.6 1.0
C4' P:A45 3.8 27.7 1.0
CB A:ASP499 3.8 22.4 1.0
C2' P:A45 4.0 27.7 1.0
N A:ASP495 4.1 12.6 1.0
C A:ASP495 4.2 12.6 1.0
CB A:ASP495 4.3 12.6 1.0
CA A:ASP495 4.4 12.6 1.0
N A:ASP499 4.4 22.4 1.0
N A:ASP497 4.5 15.3 1.0
CA A:ASP499 4.5 22.4 1.0
CB A:ASP497 4.5 15.3 1.0
C5' P:A45 4.6 27.7 1.0
NH2 A:ARG460 4.6 14.1 1.0
O A:ASP497 4.6 15.3 1.0
C A:ASP497 4.7 15.3 1.0
CA A:ASP497 4.8 15.3 1.0
O4' P:A45 5.0 27.7 1.0

Reference:

G.Kokic, F.R.Wagner, A.Chernev, H.Urlaub, P.Cramer. Structural Basis of Human Transcription-Dna Repair Coupling. Nature 2021.
ISSN: ESSN 1476-4687
PubMed: 34526721
DOI: 10.1038/S41586-021-03906-4
Page generated: Thu Oct 3 03:28:36 2024

Last articles

Cl in 3MDV
Cl in 3MDQ
Cl in 3MCY
Cl in 3MC4
Cl in 3MAE
Cl in 3MC5
Cl in 3MC3
Cl in 3MC1
Cl in 3MBH
Cl in 3MBY
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy