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Magnesium in PDB 7ow8: Cryoem Structure of the Abc Transporter Bmra E504A Mutant in Complex with Atp-Mg

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryoem Structure of the Abc Transporter Bmra E504A Mutant in Complex with Atp-Mg (pdb code 7ow8). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Cryoem Structure of the Abc Transporter Bmra E504A Mutant in Complex with Atp-Mg, PDB code: 7ow8:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7ow8

Go back to Magnesium Binding Sites List in 7ow8
Magnesium binding site 1 out of 2 in the Cryoem Structure of the Abc Transporter Bmra E504A Mutant in Complex with Atp-Mg


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryoem Structure of the Abc Transporter Bmra E504A Mutant in Complex with Atp-Mg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg602

b:56.1
occ:1.00
O2B A:ATP601 2.0 72.2 1.0
OE1 A:GLN422 2.0 73.6 1.0
O2G A:ATP601 2.0 72.2 1.0
NE2 A:GLN422 2.2 73.6 1.0
CD A:GLN422 2.3 73.6 1.0
OG1 A:THR381 2.5 73.6 1.0
PB A:ATP601 2.9 72.2 1.0
O3B A:ATP601 3.0 72.2 1.0
PG A:ATP601 3.0 72.2 1.0
O3A A:ATP601 3.3 72.2 1.0
OG B:SER480 3.3 73.6 1.0
N B:GLY481 3.6 73.6 1.0
CB A:THR381 3.6 73.6 1.0
O1G A:ATP601 3.7 72.2 1.0
CG A:GLN422 3.7 73.6 1.0
CA B:GLY481 4.0 73.6 1.0
O1B A:ATP601 4.3 72.2 1.0
O3G A:ATP601 4.3 72.2 1.0
CG2 A:THR381 4.3 73.6 1.0
OD1 A:ASP503 4.4 73.6 1.0
CB A:GLN422 4.5 73.6 1.0
CB B:SER480 4.6 73.6 1.0
N A:THR381 4.7 73.6 1.0
C B:SER480 4.7 73.6 1.0
OD2 A:ASP503 4.7 73.6 1.0
PA A:ATP601 4.7 72.2 1.0
CA A:THR381 4.8 73.6 1.0
CA B:SER480 4.9 73.6 1.0
C B:GLY481 4.9 73.6 1.0
O1A A:ATP601 4.9 72.2 1.0
N B:GLY482 5.0 73.6 1.0
CG A:ASP503 5.0 73.6 1.0

Magnesium binding site 2 out of 2 in 7ow8

Go back to Magnesium Binding Sites List in 7ow8
Magnesium binding site 2 out of 2 in the Cryoem Structure of the Abc Transporter Bmra E504A Mutant in Complex with Atp-Mg


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryoem Structure of the Abc Transporter Bmra E504A Mutant in Complex with Atp-Mg within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg602

b:55.3
occ:1.00
O2B B:ATP601 2.0 54.1 1.0
OE1 B:GLN422 2.0 73.6 1.0
O2G B:ATP601 2.0 54.1 1.0
NE2 B:GLN422 2.2 73.6 1.0
CD B:GLN422 2.3 73.6 1.0
OG1 B:THR381 2.5 73.6 1.0
PB B:ATP601 2.9 54.1 1.0
O3B B:ATP601 3.0 54.1 1.0
PG B:ATP601 3.0 54.1 1.0
O3A B:ATP601 3.3 54.1 1.0
OG A:SER480 3.3 73.6 1.0
N A:GLY481 3.5 73.6 1.0
CB B:THR381 3.6 73.6 1.0
O1G B:ATP601 3.7 54.1 1.0
CG B:GLN422 3.7 73.6 1.0
CA A:GLY481 4.0 73.6 1.0
O1B B:ATP601 4.3 54.1 1.0
O3G B:ATP601 4.3 54.1 1.0
CG2 B:THR381 4.3 73.6 1.0
OD1 B:ASP503 4.4 73.6 1.0
CB B:GLN422 4.5 73.6 1.0
CB A:SER480 4.6 73.6 1.0
C A:SER480 4.6 73.6 1.0
OD2 B:ASP503 4.7 73.6 1.0
N B:THR381 4.7 73.6 1.0
PA B:ATP601 4.7 54.1 1.0
CA B:THR381 4.7 73.6 1.0
CA A:SER480 4.8 73.6 1.0
C A:GLY481 4.9 73.6 1.0
N A:GLY482 4.9 73.6 1.0
O1A B:ATP601 4.9 54.1 1.0
CG B:ASP503 5.0 73.6 1.0

Reference:

V.Chaptal, V.Zampieri, B.Wiseman, C.Orelle, J.Martin, K.A.Nguyen, A.Gobet, M.Di Cesare, S.Magnard, W.Javed, J.Eid, A.Kilburg, M.Peuchmaur, J.Marcoux, L.Monticelli, M.Hogbom, G.Schoehn, J.M.Jault, A.Boumendjel, P.Falson. Substrate-Bound and Substrate-Free Outward-Facing Structures of A Multidrug Abc Exporter. Sci Adv V. 8 G9215 2022.
ISSN: ESSN 2375-2548
PubMed: 35080979
DOI: 10.1126/SCIADV.ABG9215
Page generated: Thu Oct 3 03:36:07 2024

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