Atomistry » Magnesium » PDB 7ou0-7p52 » 7p1g
Atomistry »
  Magnesium »
    PDB 7ou0-7p52 »
      7p1g »

Magnesium in PDB 7p1g: Structure of the P. Aeruginosa Exoy-F-Actin Complex

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of the P. Aeruginosa Exoy-F-Actin Complex (pdb code 7p1g). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 10 binding sites of Magnesium where determined in the Structure of the P. Aeruginosa Exoy-F-Actin Complex, PDB code: 7p1g:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 10 in 7p1g

Go back to Magnesium Binding Sites List in 7p1g
Magnesium binding site 1 out of 10 in the Structure of the P. Aeruginosa Exoy-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the P. Aeruginosa Exoy-F-Actin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Mg401

b:54.4
occ:1.00
 OD1 M:ASP212 1.8 63.6 1.0
NE2 M:HIS291 2.0 53.4 1.0
CG M:ASP212 2.6 63.6 1.0
OD2 M:ASP212 2.9 63.6 1.0
CE1 M:HIS291 3.0 53.4 1.0
CD2 M:HIS291 3.0 53.4 1.0
O2' M:GH3402 3.5 73.2 1.0
O M:GLY82 3.8 62.4 1.0
C3' M:GH3402 3.8 73.2 1.0
CB M:ASP214 3.9 54.0 1.0
CG M:ASP214 4.0 54.0 1.0
CB M:ASP212 4.0 63.6 1.0
ND1 M:HIS291 4.1 53.4 1.0
CG M:HIS291 4.1 53.4 1.0
C2' M:GH3402 4.1 73.2 1.0
OD1 M:ASP214 4.3 54.0 1.0
CA M:ASP214 4.5 54.0 1.0
OD2 M:ASP214 4.5 54.0 1.0
C M:GLY82 4.8 62.4 1.0
N M:ASP214 5.0 54.0 1.0

Magnesium binding site 2 out of 10 in 7p1g

Go back to Magnesium Binding Sites List in 7p1g
Magnesium binding site 2 out of 10 in the Structure of the P. Aeruginosa Exoy-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of the P. Aeruginosa Exoy-F-Actin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg401

b:20.9
occ:1.00
 O1B C:ADP402 1.9 33.3 1.0
O4 C:PO4403 2.1 35.8 1.0
PB C:ADP402 3.3 33.3 1.0
O1A C:ADP402 3.4 33.3 1.0
P C:PO4403 3.6 35.8 1.0
O3B C:ADP402 3.8 33.3 1.0
O1 C:PO4403 4.0 35.8 1.0
OD2 C:ASP11 4.1 22.9 1.0
OD1 C:ASP154 4.2 18.1 1.0
OE1 C:GLN137 4.2 22.6 1.0
O3A C:ADP402 4.2 33.3 1.0
O2B C:ADP402 4.3 33.3 1.0
CA C:GLY156 4.3 23.4 1.0
NE2 C:GLN137 4.3 22.6 1.0
CD C:GLN137 4.4 22.6 1.0
O2 C:PO4403 4.4 35.8 1.0
O3 C:PO4403 4.5 35.8 1.0
OD2 C:ASP154 4.5 18.1 1.0
OD1 C:ASP11 4.5 22.9 1.0
PA C:ADP402 4.5 33.3 1.0
CG2 C:VAL339 4.6 33.3 1.0
CG C:ASP11 4.7 22.9 1.0
CG C:ASP154 4.8 18.1 1.0
CA C:GLY13 4.9 24.3 1.0
CA C:GLY301 4.9 17.2 1.0
CB C:VAL339 5.0 33.3 1.0
NZ C:LYS18 5.0 33.3 1.0

Magnesium binding site 3 out of 10 in 7p1g

Go back to Magnesium Binding Sites List in 7p1g
Magnesium binding site 3 out of 10 in the Structure of the P. Aeruginosa Exoy-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Structure of the P. Aeruginosa Exoy-F-Actin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Mg401

b:54.4
occ:1.00
 OD1 K:ASP212 1.8 63.6 1.0
NE2 K:HIS291 2.0 53.4 1.0
CG K:ASP212 2.6 63.6 1.0
OD2 K:ASP212 2.9 63.6 1.0
CE1 K:HIS291 3.0 53.4 1.0
CD2 K:HIS291 3.0 53.4 1.0
O2' K:GH3402 3.5 73.2 1.0
O K:GLY82 3.8 62.4 1.0
C3' K:GH3402 3.8 73.2 1.0
CB K:ASP214 3.9 54.0 1.0
CG K:ASP214 4.0 54.0 1.0
CB K:ASP212 4.0 63.6 1.0
ND1 K:HIS291 4.1 53.4 1.0
CG K:HIS291 4.1 53.4 1.0
C2' K:GH3402 4.1 73.2 1.0
OD1 K:ASP214 4.3 54.0 1.0
CA K:ASP214 4.5 54.0 1.0
OD2 K:ASP214 4.5 54.0 1.0
C K:GLY82 4.8 62.4 1.0
N K:ASP214 5.0 54.0 1.0

Magnesium binding site 4 out of 10 in 7p1g

Go back to Magnesium Binding Sites List in 7p1g
Magnesium binding site 4 out of 10 in the Structure of the P. Aeruginosa Exoy-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Structure of the P. Aeruginosa Exoy-F-Actin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg401

b:20.9
occ:1.00
 O1B A:ADP402 1.9 33.3 1.0
O4 A:PO4403 2.1 35.8 1.0
PB A:ADP402 3.3 33.3 1.0
O1A A:ADP402 3.4 33.3 1.0
P A:PO4403 3.6 35.8 1.0
O3B A:ADP402 3.8 33.3 1.0
O1 A:PO4403 4.0 35.8 1.0
OD2 A:ASP11 4.1 22.9 1.0
OD1 A:ASP154 4.2 18.1 1.0
OE1 A:GLN137 4.2 22.6 1.0
O3A A:ADP402 4.2 33.3 1.0
O2B A:ADP402 4.3 33.3 1.0
CA A:GLY156 4.3 23.4 1.0
NE2 A:GLN137 4.3 22.6 1.0
CD A:GLN137 4.4 22.6 1.0
O2 A:PO4403 4.4 35.8 1.0
O3 A:PO4403 4.5 35.8 1.0
OD2 A:ASP154 4.5 18.1 1.0
OD1 A:ASP11 4.5 22.9 1.0
PA A:ADP402 4.5 33.3 1.0
CG2 A:VAL339 4.6 33.3 1.0
CG A:ASP11 4.7 22.9 1.0
CG A:ASP154 4.8 18.1 1.0
CA A:GLY13 4.9 24.3 1.0
CA A:GLY301 4.9 17.2 1.0
CB A:VAL339 5.0 33.3 1.0
NZ A:LYS18 5.0 33.3 1.0

Magnesium binding site 5 out of 10 in 7p1g

Go back to Magnesium Binding Sites List in 7p1g
Magnesium binding site 5 out of 10 in the Structure of the P. Aeruginosa Exoy-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Structure of the P. Aeruginosa Exoy-F-Actin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg401

b:54.4
occ:1.00
 OD1 L:ASP212 1.8 63.6 1.0
NE2 L:HIS291 2.0 53.4 1.0
CG L:ASP212 2.6 63.6 1.0
OD2 L:ASP212 2.9 63.6 1.0
CE1 L:HIS291 3.0 53.4 1.0
CD2 L:HIS291 3.0 53.4 1.0
O2' L:GH3402 3.5 73.2 1.0
O L:GLY82 3.8 62.4 1.0
C3' L:GH3402 3.8 73.2 1.0
CB L:ASP214 3.9 54.0 1.0
CG L:ASP214 4.0 54.0 1.0
CB L:ASP212 4.0 63.6 1.0
ND1 L:HIS291 4.1 53.4 1.0
CG L:HIS291 4.1 53.4 1.0
C2' L:GH3402 4.1 73.2 1.0
OD1 L:ASP214 4.3 54.0 1.0
CA L:ASP214 4.5 54.0 1.0
OD2 L:ASP214 4.5 54.0 1.0
C L:GLY82 4.8 62.4 1.0
N L:ASP214 5.0 54.0 1.0

Magnesium binding site 6 out of 10 in 7p1g

Go back to Magnesium Binding Sites List in 7p1g
Magnesium binding site 6 out of 10 in the Structure of the P. Aeruginosa Exoy-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Structure of the P. Aeruginosa Exoy-F-Actin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg401

b:20.9
occ:1.00
 O1B B:ADP402 1.9 33.3 1.0
O4 B:PO4403 2.1 35.8 1.0
PB B:ADP402 3.3 33.3 1.0
O1A B:ADP402 3.4 33.3 1.0
P B:PO4403 3.6 35.8 1.0
O3B B:ADP402 3.8 33.3 1.0
O1 B:PO4403 4.0 35.8 1.0
OD2 B:ASP11 4.1 22.9 1.0
OD1 B:ASP154 4.2 18.1 1.0
OE1 B:GLN137 4.2 22.6 1.0
O3A B:ADP402 4.2 33.3 1.0
O2B B:ADP402 4.3 33.3 1.0
CA B:GLY156 4.3 23.4 1.0
NE2 B:GLN137 4.3 22.6 1.0
CD B:GLN137 4.4 22.6 1.0
O2 B:PO4403 4.4 35.8 1.0
O3 B:PO4403 4.5 35.8 1.0
OD2 B:ASP154 4.5 18.1 1.0
OD1 B:ASP11 4.5 22.9 1.0
PA B:ADP402 4.5 33.3 1.0
CG2 B:VAL339 4.6 33.3 1.0
CG B:ASP11 4.7 22.9 1.0
CG B:ASP154 4.8 18.1 1.0
CA B:GLY13 4.9 24.3 1.0
CA B:GLY301 4.9 17.2 1.0
CB B:VAL339 5.0 33.3 1.0
NZ B:LYS18 5.0 33.3 1.0

Magnesium binding site 7 out of 10 in 7p1g

Go back to Magnesium Binding Sites List in 7p1g
Magnesium binding site 7 out of 10 in the Structure of the P. Aeruginosa Exoy-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Structure of the P. Aeruginosa Exoy-F-Actin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
N:Mg401

b:54.4
occ:1.00
 OD1 N:ASP212 1.8 63.6 1.0
NE2 N:HIS291 2.0 53.4 1.0
CG N:ASP212 2.6 63.6 1.0
OD2 N:ASP212 2.9 63.6 1.0
CE1 N:HIS291 3.0 53.4 1.0
CD2 N:HIS291 3.0 53.4 1.0
O2' N:GH3402 3.5 73.2 1.0
O N:GLY82 3.8 62.4 1.0
C3' N:GH3402 3.8 73.2 1.0
CB N:ASP214 3.9 54.0 1.0
CG N:ASP214 4.0 54.0 1.0
CB N:ASP212 4.0 63.6 1.0
ND1 N:HIS291 4.1 53.4 1.0
CG N:HIS291 4.1 53.4 1.0
C2' N:GH3402 4.1 73.2 1.0
OD1 N:ASP214 4.3 54.0 1.0
CA N:ASP214 4.5 54.0 1.0
OD2 N:ASP214 4.5 54.0 1.0
C N:GLY82 4.8 62.4 1.0
N N:ASP214 5.0 54.0 1.0

Magnesium binding site 8 out of 10 in 7p1g

Go back to Magnesium Binding Sites List in 7p1g
Magnesium binding site 8 out of 10 in the Structure of the P. Aeruginosa Exoy-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Structure of the P. Aeruginosa Exoy-F-Actin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg401

b:20.9
occ:1.00
 O1B D:ADP402 1.9 33.3 1.0
O4 D:PO4403 2.1 35.8 1.0
PB D:ADP402 3.3 33.3 1.0
O1A D:ADP402 3.4 33.3 1.0
P D:PO4403 3.6 35.8 1.0
O3B D:ADP402 3.8 33.3 1.0
O1 D:PO4403 4.0 35.8 1.0
OD2 D:ASP11 4.1 22.9 1.0
OD1 D:ASP154 4.2 18.1 1.0
OE1 D:GLN137 4.2 22.6 1.0
O3A D:ADP402 4.2 33.3 1.0
O2B D:ADP402 4.3 33.3 1.0
CA D:GLY156 4.3 23.4 1.0
NE2 D:GLN137 4.3 22.6 1.0
CD D:GLN137 4.4 22.6 1.0
O2 D:PO4403 4.4 35.8 1.0
O3 D:PO4403 4.5 35.8 1.0
OD2 D:ASP154 4.5 18.1 1.0
OD1 D:ASP11 4.5 22.9 1.0
PA D:ADP402 4.5 33.3 1.0
CG2 D:VAL339 4.6 33.3 1.0
CG D:ASP11 4.7 22.9 1.0
CG D:ASP154 4.8 18.1 1.0
CA D:GLY13 4.9 24.3 1.0
CA D:GLY301 4.9 17.2 1.0
CB D:VAL339 5.0 33.3 1.0
NZ D:LYS18 5.0 33.3 1.0

Magnesium binding site 9 out of 10 in 7p1g

Go back to Magnesium Binding Sites List in 7p1g
Magnesium binding site 9 out of 10 in the Structure of the P. Aeruginosa Exoy-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Structure of the P. Aeruginosa Exoy-F-Actin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
O:Mg401

b:54.4
occ:1.00
 OD1 O:ASP212 1.8 63.6 1.0
NE2 O:HIS291 2.0 53.4 1.0
CG O:ASP212 2.6 63.6 1.0
OD2 O:ASP212 2.9 63.6 1.0
CE1 O:HIS291 3.0 53.4 1.0
CD2 O:HIS291 3.0 53.4 1.0
O2' O:GH3402 3.5 73.2 1.0
O O:GLY82 3.8 62.4 1.0
C3' O:GH3402 3.8 73.2 1.0
CB O:ASP214 3.9 54.0 1.0
CG O:ASP214 4.0 54.0 1.0
CB O:ASP212 4.0 63.6 1.0
ND1 O:HIS291 4.1 53.4 1.0
CG O:HIS291 4.1 53.4 1.0
C2' O:GH3402 4.1 73.2 1.0
OD1 O:ASP214 4.3 54.0 1.0
CA O:ASP214 4.5 54.0 1.0
OD2 O:ASP214 4.5 54.0 1.0
C O:GLY82 4.8 62.4 1.0
N O:ASP214 5.0 54.0 1.0

Magnesium binding site 10 out of 10 in 7p1g

Go back to Magnesium Binding Sites List in 7p1g
Magnesium binding site 10 out of 10 in the Structure of the P. Aeruginosa Exoy-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Structure of the P. Aeruginosa Exoy-F-Actin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg401

b:20.9
occ:1.00
 O1B E:ADP402 1.9 33.3 1.0
O4 E:PO4403 2.1 35.8 1.0
PB E:ADP402 3.3 33.3 1.0
O1A E:ADP402 3.4 33.3 1.0
P E:PO4403 3.6 35.8 1.0
O3B E:ADP402 3.8 33.3 1.0
O1 E:PO4403 4.0 35.8 1.0
OD2 E:ASP11 4.1 22.9 1.0
OD1 E:ASP154 4.2 18.1 1.0
OE1 E:GLN137 4.2 22.6 1.0
O3A E:ADP402 4.2 33.3 1.0
O2B E:ADP402 4.3 33.3 1.0
CA E:GLY156 4.3 23.4 1.0
NE2 E:GLN137 4.3 22.6 1.0
CD E:GLN137 4.4 22.6 1.0
O2 E:PO4403 4.4 35.8 1.0
O3 E:PO4403 4.5 35.8 1.0
OD2 E:ASP154 4.5 18.1 1.0
OD1 E:ASP11 4.5 22.9 1.0
PA E:ADP402 4.5 33.3 1.0
CG2 E:VAL339 4.6 33.3 1.0
CG E:ASP11 4.7 22.9 1.0
CG E:ASP154 4.8 18.1 1.0
CA E:GLY13 4.9 24.3 1.0
CA E:GLY301 4.9 17.2 1.0
CB E:VAL339 5.0 33.3 1.0
NZ E:LYS18 5.0 33.3 1.0

Reference:

A.Belyy, F.Merino, U.Mechold, S.Raunser. Mechanism of Actin-Dependent Activation of Nucleotidyl Cyclase Toxins From Bacterial Human Pathogens To Be Published.
DOI: 10.1038/S41467-021-26889-2
Page generated: Thu Oct 3 03:59:08 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy